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  5. AT3G58980

AT3G58980


Description : F-box family protein


Gene families : OG0000914 (Archaeplastida) Phylogenetic Tree(s): OG0000914_tree ,
OG_05_0000543 (LandPlants) Phylogenetic Tree(s): OG_05_0000543_tree ,
OG_06_0000263 (SeedPlants) Phylogenetic Tree(s): OG_06_0000263_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G58980
Cluster HCCA: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
AT1G47920 No alias RNI-like superfamily protein 0.1 Archaeplastida
AT1G52650 No alias F-box/RNI-like superfamily protein 0.03 Archaeplastida
AT3G58860 No alias F-box/RNI-like superfamily protein 0.06 Archaeplastida
AT3G59230 No alias RNI-like superfamily protein 0.03 Archaeplastida
AT3G62440 No alias F-box/RNI-like superfamily protein 0.03 Archaeplastida
AT5G15620 No alias F-box/RNI-like superfamily protein 0.05 Archaeplastida
AT5G25860 No alias F-box/RNI-like superfamily protein 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
BP GO:0000820 regulation of glutamine family amino acid metabolic process IEP Neighborhood
BP GO:0000821 regulation of arginine metabolic process IEP Neighborhood
BP GO:0001505 regulation of neurotransmitter levels IEP Neighborhood
CC GO:0005815 microtubule organizing center IEP Neighborhood
CC GO:0005819 spindle IEP Neighborhood
CC GO:0005874 microtubule IEP Neighborhood
CC GO:0005881 cytoplasmic microtubule IEP Neighborhood
BP GO:0006521 regulation of cellular amino acid metabolic process IEP Neighborhood
BP GO:0006544 glycine metabolic process IEP Neighborhood
BP GO:0006546 glycine catabolic process IEP Neighborhood
BP GO:0006636 unsaturated fatty acid biosynthetic process IEP Neighborhood
BP GO:0006766 vitamin metabolic process IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008878 glucose-1-phosphate adenylyltransferase activity IEP Neighborhood
BP GO:0009071 serine family amino acid catabolic process IEP Neighborhood
BP GO:0009106 lipoate metabolic process IEP Neighborhood
CC GO:0009524 phragmoplast IEP Neighborhood
BP GO:0009612 response to mechanical stimulus IEP Neighborhood
BP GO:0009652 thigmotropism IEP Neighborhood
BP GO:0009718 anthocyanin-containing compound biosynthetic process IEP Neighborhood
BP GO:0009749 response to glucose IEP Neighborhood
BP GO:0009958 positive gravitropism IEP Neighborhood
CC GO:0010005 cortical microtubule, transverse to long axis IEP Neighborhood
BP GO:0010089 xylem development IEP Neighborhood
BP GO:0010150 leaf senescence IEP Neighborhood
MF GO:0010307 acetylglutamate kinase regulator activity IEP Neighborhood
BP GO:0010565 regulation of cellular ketone metabolic process IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0019207 kinase regulator activity IEP Neighborhood
BP GO:0019216 regulation of lipid metabolic process IEP Neighborhood
BP GO:0019217 regulation of fatty acid metabolic process IEP Neighborhood
BP GO:0033238 regulation of cellular amine metabolic process IEP Neighborhood
BP GO:0033559 unsaturated fatty acid metabolic process IEP Neighborhood
BP GO:0042133 neurotransmitter metabolic process IEP Neighborhood
BP GO:0042135 neurotransmitter catabolic process IEP Neighborhood
BP GO:0042304 regulation of fatty acid biosynthetic process IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046283 anthocyanin-containing compound metabolic process IEP Neighborhood
BP GO:0046890 regulation of lipid biosynthetic process IEP Neighborhood
CC GO:0055028 cortical microtubule IEP Neighborhood
BP GO:0062012 regulation of small molecule metabolic process IEP Neighborhood
MF GO:0070566 adenylyltransferase activity IEP Neighborhood
BP GO:0090368 regulation of ornithine metabolic process IEP Neighborhood
BP GO:0090693 plant organ senescence IEP Neighborhood
CC GO:0099080 supramolecular complex IEP Neighborhood
CC GO:0099081 supramolecular polymer IEP Neighborhood
CC GO:0099512 supramolecular fiber IEP Neighborhood
CC GO:0099513 polymeric cytoskeletal fiber IEP Neighborhood
BP GO:1900079 regulation of arginine biosynthetic process IEP Neighborhood
BP GO:2000013 regulation of arginine biosynthetic process via ornithine IEP Neighborhood
BP GO:2000282 regulation of cellular amino acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR013101 Leu-rich_rpt_2 452 480
IPR013101 Leu-rich_rpt_2 153 179
IPR001810 F-box_dom 3 38
No external refs found!