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AT3G59000


Description : F-box/RNI-like superfamily protein


Gene families : OG0000914 (Archaeplastida) Phylogenetic Tree(s): OG0000914_tree ,
OG_05_0000543 (LandPlants) Phylogenetic Tree(s): OG_05_0000543_tree ,
OG_06_0000263 (SeedPlants) Phylogenetic Tree(s): OG_06_0000263_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G59000
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AT1G19070 No alias F-box family protein 0.03 Archaeplastida
AT3G49150 No alias F-box/RNI-like superfamily protein 0.04 Archaeplastida
AT3G58930 No alias F-box/RNI-like superfamily protein 0.03 Archaeplastida
AT5G38392 No alias No description available 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000959 mitochondrial RNA metabolic process IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0007050 cell cycle arrest IEP Neighborhood
BP GO:0009410 response to xenobiotic stimulus IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0016233 telomere capping IEP Neighborhood
MF GO:0042162 telomeric DNA binding IEP Neighborhood
MF GO:0043047 single-stranded telomeric DNA binding IEP Neighborhood
BP GO:0045786 negative regulation of cell cycle IEP Neighborhood
BP GO:0080156 mitochondrial mRNA modification IEP Neighborhood
MF GO:0098847 sequence-specific single stranded DNA binding IEP Neighborhood
BP GO:1900864 mitochondrial RNA modification IEP Neighborhood
InterPro domains Description Start Stop
IPR013101 Leu-rich_rpt_2 163 187
IPR001810 F-box_dom 6 38
No external refs found!