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  5. Mp1g21450.1

Mp1g21450.1


Description : component PWR of HDA9-PWR deacetylation complex


Gene families : OG0002623 (Archaeplastida) Phylogenetic Tree(s): OG0002623_tree ,
OG_05_0003107 (LandPlants) Phylogenetic Tree(s): OG_05_0003107_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g21450.1
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00108p00114900 evm_27.TU.AmTr_v1... Chromatin organisation.histone modifications.histone... 0.02 Archaeplastida
AT3G52250 No alias Duplicated homeodomain-like superfamily protein 0.04 Archaeplastida
GSVIVT01016309001 No alias Chromatin organisation.histone modifications.histone... 0.03 Archaeplastida
Gb_00676 No alias component PWR of HDA9-PWR deacetylation complex 0.03 Archaeplastida
Gb_13421 No alias component PWR of HDA9-PWR deacetylation complex 0.03 Archaeplastida
Gb_36724 No alias component PWR of HDA9-PWR deacetylation complex 0.02 Archaeplastida
LOC_Os05g03550.1 No alias component PWR of HDA9-PWR deacetylation complex 0.07 Archaeplastida
MA_10428429g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_104862g0010 No alias component PWR of HDA9-PWR deacetylation complex 0.03 Archaeplastida
MA_14319g0010 No alias component PWR of HDA9-PWR deacetylation complex 0.03 Archaeplastida
Pp3c11_8780V3.1 No alias Duplicated homeodomain-like superfamily protein 0.04 Archaeplastida
Pp3c11_8790V3.1 No alias Duplicated homeodomain-like superfamily protein 0.06 Archaeplastida
Pp3c12_21290V3.1 No alias Duplicated homeodomain-like superfamily protein 0.03 Archaeplastida
Pp3c12_21500V3.1 No alias Duplicated homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c4_6990V3.1 No alias Duplicated homeodomain-like superfamily protein 0.05 Archaeplastida
Pp3c4_7100V3.1 No alias Duplicated homeodomain-like superfamily protein 0.06 Archaeplastida
Pp3c7_16800V3.1 No alias Duplicated homeodomain-like superfamily protein 0.08 Archaeplastida
Smo78396 No alias Chromatin organisation.histone modifications.histone... 0.03 Archaeplastida
Smo79245 No alias Chromatin organisation.histone modifications.histone... 0.03 Archaeplastida
Zm00001e027573_P003 No alias component PWR of HDA9-PWR deacetylation complex 0.05 Archaeplastida
Zm00001e029482_P006 No alias component PWR of HDA9-PWR deacetylation complex 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006354 DNA-templated transcription, elongation IEP Neighborhood
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0007030 Golgi organization IEP Neighborhood
CC GO:0008023 transcription elongation factor complex IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
CC GO:0016593 Cdc73/Paf1 complex IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 1290 1331
IPR001005 SANT/Myb 963 1005
No external refs found!