Description : 60S ribosomal protein L16, mitochondrial OS=Marchantia polymorpha (sp|p26862|rm16_marpo : 110.0)
Gene families : OG0002172 (Archaeplastida) Phylogenetic Tree(s): OG0002172_tree ,
OG_05_0002418 (LandPlants) Phylogenetic Tree(s): OG_05_0002418_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Mp1g22400.1 | |
Cluster | HCCA: Cluster_8 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
ATCG00790 | RPL16 | ribosomal protein L16 | 0.09 | Archaeplastida | |
ATMG00080 | RPL16 | ribosomal protein L16 | 0.03 | Archaeplastida | |
Cre06.g278224 | No alias | 60S ribosomal protein L16, mitochondrial OS=Prototheca... | 0.02 | Archaeplastida | |
Gb_40955 | No alias | 50S ribosomal protein L16, chloroplastic... | 0.08 | Archaeplastida | |
LOC_Os01g57958.1 | No alias | 50S ribosomal protein L16, chloroplastic OS=Oryza nivara... | 0.08 | Archaeplastida | |
LOC_Os04g16826.1 | No alias | 50S ribosomal protein L16, chloroplastic OS=Oryza nivara... | 0.08 | Archaeplastida | |
LOC_Os10g21344.1 | No alias | 50S ribosomal protein L16, chloroplastic OS=Oryza nivara... | 0.08 | Archaeplastida | |
LOC_Os12g34128.1 | No alias | component mtRPL16 of large ribosomal subunit proteome | 0.03 | Archaeplastida | |
Pp3c2_23477V3.1 | No alias | ribosomal protein L16 | 0.1 | Archaeplastida | |
Smo137887 | No alias | 50S ribosomal protein L16, chloroplastic OS=Huperzia lucidula | 0.04 | Archaeplastida | |
Solyc00g500032.1.1 | No alias | 50S ribosomal protein L16, chloroplastic OS=Atropa... | 0.11 | Archaeplastida | |
Solyc00g500077.1.1 | No alias | 50S ribosomal protein L16, chloroplastic OS=Atropa... | 0.11 | Archaeplastida | |
Solyc05g045840.1.1 | No alias | 60S ribosomal protein L16, mitochondrial OS=Arabidopsis... | 0.05 | Archaeplastida | |
Solyc09g015860.1.1 | No alias | no hits & (original description: none) | 0.05 | Archaeplastida | |
Solyc10g006910.3.1 | No alias | 50S ribosomal protein L16, chloroplastic OS=Nicotiana... | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEP | Neighborhood |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Neighborhood |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0006351 | transcription, DNA-templated | IEP | Neighborhood |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
MF | GO:0008324 | cation transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0008519 | ammonium transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0015075 | ion transmembrane transporter activity | IEP | Neighborhood |
BP | GO:0015696 | ammonium transport | IEP | Neighborhood |
BP | GO:0015985 | energy coupled proton transport, down electrochemical gradient | IEP | Neighborhood |
BP | GO:0015986 | ATP synthesis coupled proton transport | IEP | Neighborhood |
BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | Neighborhood |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | Neighborhood |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | Neighborhood |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Neighborhood |
MF | GO:0019843 | rRNA binding | IEP | Neighborhood |
BP | GO:0032774 | RNA biosynthetic process | IEP | Neighborhood |
CC | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | IEP | Neighborhood |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Neighborhood |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Neighborhood |
CC | GO:0045263 | proton-transporting ATP synthase complex, coupling factor F(o) | IEP | Neighborhood |
BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
MF | GO:0048038 | quinone binding | IEP | Neighborhood |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | Neighborhood |
MF | GO:0097747 | RNA polymerase activity | IEP | Neighborhood |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Neighborhood |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR016180 | Ribosomal_L10e/L16 | 55 | 114 |
No external refs found! |