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  5. Mp1g22580.1

Mp1g22580.1


Description : basal transcription factor (TFIIb)


Gene families : OG0001457 (Archaeplastida) Phylogenetic Tree(s): OG0001457_tree ,
OG_05_0004318 (LandPlants) Phylogenetic Tree(s): OG_05_0004318_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g22580.1
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
LOC_Os09g36440.1 No alias basal transcription factor (TFIIb) 0.02 Archaeplastida
Pp3c1_38410V3.1 No alias Cyclin-like family protein 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0017025 TBP-class protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity IEP Neighborhood
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Neighborhood
BP GO:0046434 organophosphate catabolic process IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
BP GO:0052646 alditol phosphate metabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR013137 Znf_TFIIB 5 47
IPR013150 TFIIB_cyclin 111 175
IPR013150 TFIIB_cyclin 213 280
No external refs found!