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  5. Mp1g23190.1

Mp1g23190.1


Description : siRNA-integrating factor (AGO)


Gene families : OG0000124 (Archaeplastida) Phylogenetic Tree(s): OG0000124_tree ,
OG_05_0001060 (LandPlants) Phylogenetic Tree(s): OG_05_0001060_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g23190.1
Cluster HCCA: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
AT1G48410 AGO1 Stabilizer of iron transporter SufD / Polynucleotidyl transferase 0.02 Archaeplastida
GSVIVT01029383001 No alias Chromatin organisation.DNA methylation.canonical... 0.03 Archaeplastida
GSVIVT01037488001 No alias Chromatin organisation.DNA methylation.canonical... 0.02 Archaeplastida
Gb_34718 No alias Protein argonaute 10 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os01g16870.3 No alias siRNA-integrating factor (AGO) 0.02 Archaeplastida
MA_10427420g0010 No alias Protein argonaute PNH1 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
MA_10428886g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc01g008960.3.1 No alias siRNA-integrating factor (AGO) 0.03 Archaeplastida
Solyc06g073540.4.1 No alias siRNA-integrating factor (AGO) 0.02 Archaeplastida
Solyc07g049500.3.1 No alias siRNA-integrating factor (AGO) 0.02 Archaeplastida
Zm00001e032609_P001 No alias siRNA-integrating factor (AGO) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005730 nucleolus IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006302 double-strand break repair IEP Neighborhood
BP GO:0006333 chromatin assembly or disassembly IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Neighborhood
MF GO:0030145 manganese ion binding IEP Neighborhood
BP GO:0031123 RNA 3'-end processing IEP Neighborhood
BP GO:0031124 mRNA 3'-end processing IEP Neighborhood
BP GO:0032200 telomere organization IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0060249 anatomical structure homeostasis IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003165 Piwi 596 907
IPR003100 PAZ_dom 322 446
IPR032472 ArgoL2 457 502
IPR032474 Argonaute_N 96 251
IPR014811 ArgoL1 264 312
No external refs found!