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  5. Mp1g23310.1

Mp1g23310.1


Description : no hits & (original description: none)


Gene families : OG0000269 (Archaeplastida) Phylogenetic Tree(s): OG0000269_tree ,
OG_05_0001686 (LandPlants) Phylogenetic Tree(s): OG_05_0001686_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g23310.1
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
MA_18871g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_18871g0020 No alias Trihelix transcription factor ASR3 OS=Arabidopsis... 0.03 Archaeplastida
Pp3c15_21740V3.1 No alias hydroxyproline-rich glycoprotein family protein 0.08 Archaeplastida
Pp3c17_6370V3.1 No alias hydroxyproline-rich glycoprotein family protein 0.01 Archaeplastida
Pp3c19_13320V3.1 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
Pp3c9_20560V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0016042 lipid catabolic process IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!