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  5. AT1G16290

AT1G16290


Description : FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, vacuole; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Lytic transglycosylase-like, catalytic (InterPro:IPR008258); Has 171 Blast hits to 155 proteins in 40 species: Archae - 0; Bacteria - 54; Metazoa - 0; Fungi - 0; Plants - 55; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink).


Gene families : OG0006005 (Archaeplastida) Phylogenetic Tree(s): OG0006005_tree ,
OG_05_0004657 (LandPlants) Phylogenetic Tree(s): OG_05_0004657_tree ,
OG_06_0004982 (SeedPlants) Phylogenetic Tree(s): OG_06_0004982_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G16290
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
Pp3c5_22590V3.1 No alias No annotation 0.03 Archaeplastida
Smo113854 No alias No description available 0.02 Archaeplastida
Solyc07g066640.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e025147_P002 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005773 vacuole IDA Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009507 chloroplast IDA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000902 cell morphogenesis IEP Neighborhood
BP GO:0000904 cell morphogenesis involved in differentiation IEP Neighborhood
BP GO:0001708 cell fate specification IEP Neighborhood
BP GO:0003006 developmental process involved in reproduction IEP Neighborhood
MF GO:0004022 alcohol dehydrogenase (NAD) activity IEP Neighborhood
MF GO:0005092 GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005093 Rab GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005365 myo-inositol transmembrane transporter activity IEP Neighborhood
MF GO:0005366 myo-inositol:proton symporter activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005884 actin filament IEP Neighborhood
BP GO:0006874 cellular calcium ion homeostasis IEP Neighborhood
BP GO:0007204 positive regulation of cytosolic calcium ion concentration IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
BP GO:0009555 pollen development IEP Neighborhood
BP GO:0009653 anatomical structure morphogenesis IEP Neighborhood
BP GO:0009664 plant-type cell wall organization IEP Neighborhood
BP GO:0009826 unidimensional cell growth IEP Neighborhood
BP GO:0009827 plant-type cell wall modification IEP Neighborhood
BP GO:0009860 pollen tube growth IEP Neighborhood
BP GO:0009932 cell tip growth IEP Neighborhood
BP GO:0009957 epidermal cell fate specification IEP Neighborhood
BP GO:0009967 positive regulation of signal transduction IEP Neighborhood
BP GO:0010208 pollen wall assembly IEP Neighborhood
BP GO:0010584 pollen exine formation IEP Neighborhood
BP GO:0010927 cellular component assembly involved in morphogenesis IEP Neighborhood
MF GO:0015166 polyol transmembrane transporter activity IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016049 cell growth IEP Neighborhood
CC GO:0017119 Golgi transport complex IEP Neighborhood
BP GO:0017157 regulation of exocytosis IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0023056 positive regulation of signaling IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
BP GO:0030834 regulation of actin filament depolymerization IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0032989 cellular component morphogenesis IEP Neighborhood
BP GO:0040007 growth IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0043244 regulation of protein complex disassembly IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0045309 protein phosphorylated amino acid binding IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0048588 developmental cell growth IEP Neighborhood
BP GO:0048589 developmental growth IEP Neighborhood
BP GO:0048868 pollen tube development IEP Neighborhood
BP GO:0048869 cellular developmental process IEP Neighborhood
BP GO:0050848 regulation of calcium-mediated signaling IEP Neighborhood
BP GO:0050850 positive regulation of calcium-mediated signaling IEP Neighborhood
BP GO:0051046 regulation of secretion IEP Neighborhood
MF GO:0051219 phosphoprotein binding IEP Neighborhood
BP GO:0051480 regulation of cytosolic calcium ion concentration IEP Neighborhood
BP GO:0051648 vesicle localization IEP Neighborhood
BP GO:0051650 establishment of vesicle localization IEP Neighborhood
BP GO:0060560 developmental growth involved in morphogenesis IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
BP GO:0060627 regulation of vesicle-mediated transport IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
CC GO:0099080 supramolecular complex IEP Neighborhood
CC GO:0099081 supramolecular polymer IEP Neighborhood
CC GO:0099512 supramolecular fiber IEP Neighborhood
CC GO:0099513 polymeric cytoskeletal fiber IEP Neighborhood
MF GO:1901618 organic hydroxy compound transmembrane transporter activity IEP Neighborhood
BP GO:1901879 regulation of protein depolymerization IEP Neighborhood
BP GO:1902533 positive regulation of intracellular signal transduction IEP Neighborhood
BP GO:1903530 regulation of secretion by cell IEP Neighborhood
InterPro domains Description Start Stop
IPR008258 Transglycosylase_SLT_dom_1 75 180
No external refs found!