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Description : BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT3G60040.1); Has 174 Blast hits to 172 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 174; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene families : OG0000914 (Archaeplastida) Phylogenetic Tree(s): OG0000914_tree ,
OG_05_0000543 (LandPlants) Phylogenetic Tree(s): OG_05_0000543_tree ,
OG_06_0000263 (SeedPlants) Phylogenetic Tree(s): OG_06_0000263_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT3G59460 | |
| Cluster | HCCA: Cluster_266 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G44180 | No alias | syntaxin-related family protein | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | ND | Interproscan |
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004338 | glucan exo-1,3-beta-glucosidase activity | IEP | Neighborhood |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Neighborhood |
| MF | GO:0004650 | polygalacturonase activity | IEP | Neighborhood |
| MF | GO:0005275 | amine transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0005345 | purine nucleobase transmembrane transporter activity | IEP | Neighborhood |
| CC | GO:0005576 | extracellular region | IEP | Neighborhood |
| MF | GO:0008422 | beta-glucosidase activity | IEP | Neighborhood |
| BP | GO:0008643 | carbohydrate transport | IEP | Neighborhood |
| MF | GO:0009824 | AMP dimethylallyltransferase activity | IEP | Neighborhood |
| BP | GO:0010093 | specification of floral organ identity | IEP | Neighborhood |
| CC | GO:0012505 | endomembrane system | IEP | Neighborhood |
| MF | GO:0015078 | proton transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015205 | nucleobase transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0015749 | monosaccharide transmembrane transport | IEP | Neighborhood |
| MF | GO:0015926 | glucosidase activity | IEP | Neighborhood |
| MF | GO:0016307 | phosphatidylinositol phosphate kinase activity | IEP | Neighborhood |
| MF | GO:0016308 | 1-phosphatidylinositol-4-phosphate 5-kinase activity | IEP | Neighborhood |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Neighborhood |
| MF | GO:0022857 | transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0034219 | carbohydrate transmembrane transport | IEP | Neighborhood |
| CC | GO:0042995 | cell projection | IEP | Neighborhood |
| MF | GO:0052622 | ATP dimethylallyltransferase activity | IEP | Neighborhood |
| MF | GO:0052623 | ADP dimethylallyltransferase activity | IEP | Neighborhood |
| CC | GO:0090406 | pollen tube | IEP | Neighborhood |
| BP | GO:0090701 | specification of plant organ identity | IEP | Neighborhood |
| CC | GO:0120025 | plasma membrane bounded cell projection | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |