Mp1g26960.1


Description : component RPL39 of LSU proteome component


Gene families : OG0003973 (Archaeplastida) Phylogenetic Tree(s): OG0003973_tree ,
OG_05_0003049 (LandPlants) Phylogenetic Tree(s): OG_05_0003049_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g26960.1
Cluster HCCA: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00026p00023530 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 Archaeplastida
AT2G25210 No alias Ribosomal protein L39 family protein 0.23 Archaeplastida
AT3G02190 No alias Ribosomal protein L39 family protein 0.15 Archaeplastida
AT4G31985 No alias Ribosomal protein L39 family protein 0.14 Archaeplastida
GSVIVT01035913001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.09 Archaeplastida
Gb_24546 No alias component RPL39 of LSU proteome component 0.06 Archaeplastida
LOC_Os02g55370.1 No alias component RPL39 of LSU proteome component 0.08 Archaeplastida
LOC_Os06g08320.1 No alias component RPL39 of LSU proteome component 0.06 Archaeplastida
MA_92282g0010 No alias component RPL39 of LSU proteome component 0.07 Archaeplastida
Pp3c15_14860V3.1 No alias Ribosomal protein L39 family protein 0.1 Archaeplastida
Pp3c9_18780V3.1 No alias Ribosomal protein L39 family protein 0.08 Archaeplastida
Solyc07g005050.3.1 No alias component RPL39 of LSU proteome component 0.13 Archaeplastida
Zm00001e023685_P001 No alias component RPL39 of LSU proteome component 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0003954 NADH dehydrogenase activity IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
CC GO:0005742 mitochondrial outer membrane translocase complex IEP Neighborhood
BP GO:0006839 mitochondrial transport IEP Neighborhood
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
BP GO:0030150 protein import into mitochondrial matrix IEP Neighborhood
MF GO:0030515 snoRNA binding IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
BP GO:0044743 protein transmembrane import into intracellular organelle IEP Neighborhood
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Neighborhood
BP GO:0065002 intracellular protein transmembrane transport IEP Neighborhood
BP GO:0070585 protein localization to mitochondrion IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0071806 protein transmembrane transport IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
BP GO:0072655 establishment of protein localization to mitochondrion IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098799 outer mitochondrial membrane protein complex IEP Neighborhood
BP GO:1990542 mitochondrial transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR000077 Ribosomal_L39 9 49
No external refs found!