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  5. AT1G16330

AT1G16330 (CYCB3;1)


Aliases : CYCB3;1

Description : cyclin b3;1


Gene families : OG0000492 (Archaeplastida) Phylogenetic Tree(s): OG0000492_tree ,
OG_05_0000357 (LandPlants) Phylogenetic Tree(s): OG_05_0000357_tree ,
OG_06_0000555 (SeedPlants) Phylogenetic Tree(s): OG_06_0000555_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G16330
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00032080 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCB-type cyclin 0.05 Archaeplastida
AMTR_s00101p00131830 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCB-type cyclin 0.06 Archaeplastida
AT1G20610 CYCB2;3 Cyclin B2;3 0.03 Archaeplastida
AT5G06150 CYCB1;2, CYC1BAT Cyclin family protein 0.05 Archaeplastida
Cpa|evm.model.tig00000769.38 No alias Cell cycle.regulation.cyclins.CYCB-type cyclin 0.02 Archaeplastida
Cre08.g370401 No alias Cyclin-B2-2 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01009895001 No alias Cell cycle.regulation.cyclins.CYCB-type cyclin 0.03 Archaeplastida
GSVIVT01025781001 No alias Cell cycle.regulation.cyclins.CYCB-type cyclin 0.03 Archaeplastida
GSVIVT01032782001 No alias Cell cycle.regulation.cyclins.CYCB-type cyclin 0.02 Archaeplastida
GSVIVT01036739001 No alias Cell cycle.regulation.cyclins.CYCB-type cyclin 0.03 Archaeplastida
LOC_Os01g59120.1 No alias cyclin (CYCB) 0.02 Archaeplastida
LOC_Os04g47580.1 No alias cyclin (CYCB) 0.04 Archaeplastida
LOC_Os05g41390.1 No alias cyclin (CYCB) 0.02 Archaeplastida
LOC_Os06g51110.2 No alias cyclin (CYCB) 0.03 Archaeplastida
MA_10393012g0020 No alias G2/mitotic-specific cyclin-2 OS=Antirrhinum majus... 0.04 Archaeplastida
MA_10433093g0020 No alias Cyclin-B2-1 OS=Oryza sativa subsp. indica... 0.02 Archaeplastida
MA_127335g0010 No alias cyclin (CYCB) 0.03 Archaeplastida
MA_19215g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_311439g0010 No alias cyclin (CYCB) 0.03 Archaeplastida
Mp2g00590.1 No alias cyclin (CYCB) 0.06 Archaeplastida
Mp5g10030.1 No alias cyclin (CYCB) 0.04 Archaeplastida
Pp3c15_21520V3.1 No alias CYCLIN B2;4 0.07 Archaeplastida
Pp3c9_18910V3.1 No alias CYCLIN B2;4 0.02 Archaeplastida
Smo230742 No alias Cell cycle.regulation.cyclins.CYCB-type cyclin 0.03 Archaeplastida
Solyc01g009040.4.1 No alias cyclin (CYCB) 0.03 Archaeplastida
Solyc07g066660.4.1 No alias cyclin (CYCB) 0.02 Archaeplastida
Zm00001e007244_P001 No alias cyclin (CYCB) 0.04 Archaeplastida
Zm00001e019528_P002 No alias cyclin (CYCB) 0.03 Archaeplastida
Zm00001e025467_P001 No alias Cyclin-B1-3 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
Zm00001e027336_P001 No alias cyclin (CYCB) 0.05 Archaeplastida
Zm00001e028899_P002 No alias cyclin (CYCB) 0.03 Archaeplastida
Zm00001e030146_P001 No alias cyclin (CYCB) 0.03 Archaeplastida
Zm00001e041485_P001 No alias cyclin (CYCB) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004693 cyclin-dependent protein serine/threonine kinase activity ISS Interproscan
MF GO:0005515 protein binding IPI Interproscan
BP GO:0010440 stomatal lineage progression RCA Interproscan
BP GO:0051726 regulation of cell cycle ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000087 mitotic M phase IEP Neighborhood
BP GO:0000226 microtubule cytoskeleton organization IEP Neighborhood
BP GO:0000279 M phase IEP Neighborhood
BP GO:0000280 nuclear division IEP Neighborhood
BP GO:0000723 telomere maintenance IEP Neighborhood
CC GO:0000786 nucleosome IEP Neighborhood
BP GO:0000911 cytokinesis by cell plate formation IEP Neighborhood
BP GO:0001708 cell fate specification IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0004003 ATP-dependent DNA helicase activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005663 DNA replication factor C complex IEP Neighborhood
CC GO:0005834 heterotrimeric G-protein complex IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006261 DNA-dependent DNA replication IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006342 chromatin silencing IEP Neighborhood
BP GO:0006344 maintenance of chromatin silencing IEP Neighborhood
BP GO:0006346 methylation-dependent chromatin silencing IEP Neighborhood
BP GO:0006349 regulation of gene expression by genetic imprinting IEP Neighborhood
BP GO:0006400 tRNA modification IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007051 spindle organization IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
MF GO:0008026 ATP-dependent helicase activity IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
MF GO:0008094 DNA-dependent ATPase activity IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
BP GO:0008283 cell proliferation IEP Neighborhood
BP GO:0008618 7-methylguanosine metabolic process IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
BP GO:0009119 ribonucleoside metabolic process IEP Neighborhood
BP GO:0009292 genetic transfer IEP Neighborhood
BP GO:0009294 DNA mediated transformation IEP Neighborhood
BP GO:0009890 negative regulation of biosynthetic process IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0009934 regulation of meristem structural organization IEP Neighborhood
BP GO:0009957 epidermal cell fate specification IEP Neighborhood
BP GO:0010208 pollen wall assembly IEP Neighborhood
BP GO:0010212 response to ionizing radiation IEP Neighborhood
BP GO:0010332 response to gamma radiation IEP Neighborhood
BP GO:0010389 regulation of G2/M transition of mitotic cell cycle IEP Neighborhood
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010584 pollen exine formation IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0010639 negative regulation of organelle organization IEP Neighborhood
BP GO:0010927 cellular component assembly involved in morphogenesis IEP Neighborhood
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Neighborhood
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016246 RNA interference IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
BP GO:0016441 posttranscriptional gene silencing IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
BP GO:0016572 histone phosphorylation IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
BP GO:0022403 cell cycle phase IEP Neighborhood
BP GO:0022603 regulation of anatomical structure morphogenesis IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
BP GO:0031048 chromatin silencing by small RNA IEP Neighborhood
BP GO:0031056 regulation of histone modification IEP Neighborhood
BP GO:0031057 negative regulation of histone modification IEP Neighborhood
BP GO:0031058 positive regulation of histone modification IEP Neighborhood
BP GO:0031060 regulation of histone methylation IEP Neighborhood
BP GO:0031062 positive regulation of histone methylation IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031324 negative regulation of cellular metabolic process IEP Neighborhood
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0031400 negative regulation of protein modification process IEP Neighborhood
BP GO:0031401 positive regulation of protein modification process IEP Neighborhood
BP GO:0032196 transposition IEP Neighborhood
BP GO:0032197 transposition, RNA-mediated IEP Neighborhood
BP GO:0032200 telomere organization IEP Neighborhood
BP GO:0032204 regulation of telomere maintenance IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0032269 negative regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0032270 positive regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0032506 cytokinetic process IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
BP GO:0033043 regulation of organelle organization IEP Neighborhood
BP GO:0033044 regulation of chromosome organization IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
CC GO:0034708 methyltransferase complex IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
BP GO:0035065 regulation of histone acetylation IEP Neighborhood
BP GO:0035067 negative regulation of histone acetylation IEP Neighborhood
CC GO:0035097 histone methyltransferase complex IEP Neighborhood
BP GO:0035194 posttranscriptional gene silencing by RNA IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0040029 regulation of gene expression, epigenetic IEP Neighborhood
BP GO:0042023 DNA endoreduplication IEP Neighborhood
BP GO:0042138 meiotic DNA double-strand break formation IEP Neighborhood
BP GO:0042278 purine nucleoside metabolic process IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043247 telomere maintenance in response to DNA damage IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
BP GO:0044030 regulation of DNA methylation IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
BP GO:0044764 multi-organism cellular process IEP Neighborhood
BP GO:0044786 cell cycle DNA replication IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0044848 biological phase IEP Neighborhood
BP GO:0045814 negative regulation of gene expression, epigenetic IEP Neighborhood
BP GO:0045892 negative regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0046128 purine ribonucleoside metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
CC GO:0048188 Set1C/COMPASS complex IEP Neighborhood
BP GO:0048451 petal formation IEP Neighborhood
BP GO:0048453 sepal formation IEP Neighborhood
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP Neighborhood
BP GO:0050793 regulation of developmental process IEP Neighborhood
BP GO:0051052 regulation of DNA metabolic process IEP Neighborhood
BP GO:0051128 regulation of cellular component organization IEP Neighborhood
BP GO:0051129 negative regulation of cellular component organization IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051225 spindle assembly IEP Neighborhood
BP GO:0051247 positive regulation of protein metabolic process IEP Neighborhood
BP GO:0051248 negative regulation of protein metabolic process IEP Neighborhood
BP GO:0051253 negative regulation of RNA metabolic process IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0051567 histone H3-K9 methylation IEP Neighborhood
BP GO:0051570 regulation of histone H3-K9 methylation IEP Neighborhood
BP GO:0051574 positive regulation of histone H3-K9 methylation IEP Neighborhood
BP GO:0060249 anatomical structure homeostasis IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0061647 histone H3-K9 modification IEP Neighborhood
MF GO:0070035 purine NTP-dependent helicase activity IEP Neighborhood
BP GO:0070925 organelle assembly IEP Neighborhood
BP GO:0071514 genetic imprinting IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:0090239 regulation of histone H4 acetylation IEP Neighborhood
BP GO:0090241 negative regulation of histone H4 acetylation IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:0098763 mitotic cell cycle phase IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
BP GO:1901068 guanosine-containing compound metabolic process IEP Neighborhood
BP GO:1901264 carbohydrate derivative transport IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901983 regulation of protein acetylation IEP Neighborhood
BP GO:1901984 negative regulation of protein acetylation IEP Neighborhood
BP GO:1901987 regulation of cell cycle phase transition IEP Neighborhood
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP Neighborhood
BP GO:1902275 regulation of chromatin organization IEP Neighborhood
BP GO:1902410 mitotic cytokinetic process IEP Neighborhood
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Neighborhood
BP GO:1902749 regulation of cell cycle G2/M phase transition IEP Neighborhood
BP GO:1903047 mitotic cell cycle process IEP Neighborhood
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:1905268 negative regulation of chromatin organization IEP Neighborhood
BP GO:1905269 positive regulation of chromatin organization IEP Neighborhood
CC GO:1905360 GTPase complex IEP Neighborhood
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2000756 regulation of peptidyl-lysine acetylation IEP Neighborhood
BP GO:2000757 negative regulation of peptidyl-lysine acetylation IEP Neighborhood
BP GO:2001251 negative regulation of chromosome organization IEP Neighborhood
BP GO:2001252 positive regulation of chromosome organization IEP Neighborhood
InterPro domains Description Start Stop
IPR004367 Cyclin_C-dom 526 641
IPR006671 Cyclin_N 398 524
No external refs found!