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  5. AT3G60020

AT3G60020 (SK5, ASK5)


Aliases : SK5, ASK5

Description : SKP1-like 5


Gene families : OG0000418 (Archaeplastida) Phylogenetic Tree(s): OG0000418_tree ,
OG_05_0000338 (LandPlants) Phylogenetic Tree(s): OG_05_0000338_tree ,
OG_06_0042063 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G60020
Cluster HCCA: Cluster_268

Target Alias Description ECC score Gene Family Method Actions
AT1G75950 ASK1, ATSKP1,... S phase kinase-associated protein 1 0.02 Archaeplastida
AT2G03160 SK19, ASK19 SKP1-like 19 0.03 Archaeplastida
AT2G03190 ASK16, SK16 SKP1-like 16 0.04 Archaeplastida
AT2G20160 MEO, ASK17 E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein 0.04 Archaeplastida
AT3G53060 SK6, ASK6 SKP1-like 6 0.05 Archaeplastida
AT3G60010 SK13, ASK13 SKP1-like 13 0.04 Archaeplastida
Mp3g00120.1 No alias target protein binding component SKP1/ASK1 of... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity ISS Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
CC GO:0000808 origin recognition complex IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Neighborhood
BP GO:0006935 chemotaxis IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
BP GO:0008219 cell death IEP Neighborhood
MF GO:0008474 palmitoyl-(protein) hydrolase activity IEP Neighborhood
BP GO:0009186 deoxyribonucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009566 fertilization IEP Neighborhood
BP GO:0009567 double fertilization forming a zygote and endosperm IEP Neighborhood
BP GO:0009873 ethylene-activated signaling pathway IEP Neighborhood
CC GO:0009898 cytoplasmic side of plasma membrane IEP Neighborhood
BP GO:0010098 suspensor development IEP Neighborhood
BP GO:0010183 pollen tube guidance IEP Neighborhood
MF GO:0015204 urea transmembrane transporter activity IEP Neighborhood
BP GO:0015840 urea transport IEP Neighborhood
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Neighborhood
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Neighborhood
BP GO:0019755 one-carbon compound transport IEP Neighborhood
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP Neighborhood
BP GO:0030154 cell differentiation IEP Neighborhood
BP GO:0042330 taxis IEP Neighborhood
BP GO:0048235 pollen sperm cell differentiation IEP Neighborhood
CC GO:0048555 generative cell nucleus IEP Neighborhood
BP GO:0048598 embryonic morphogenesis IEP Neighborhood
BP GO:0048869 cellular developmental process IEP Neighborhood
BP GO:0050918 positive chemotaxis IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Neighborhood
BP GO:0080159 zygote elongation IEP Neighborhood
CC GO:0098552 side of membrane IEP Neighborhood
CC GO:0098562 cytoplasmic side of membrane IEP Neighborhood
MF GO:0098599 palmitoyl hydrolase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR016073 Skp1_comp_POZ 4 63
IPR016072 Skp1_comp_dimer 99 151
No external refs found!