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Description : Auxin response factor 19 OS=Oryza sativa subsp. japonica (sp|q0d9r7|arfs_orysj : 116.0)
Gene families : OG0000080 (Archaeplastida) Phylogenetic Tree(s): OG0000080_tree ,
OG_05_0009308 (LandPlants) Phylogenetic Tree(s): OG_05_0009308_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Mp2g02890.1 | |
| Cluster | HCCA: Cluster_19 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00034p00110140 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.03 | Archaeplastida | |
| AMTR_s00155p00082980 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.B3... | 0.02 | Archaeplastida | |
| AMTR_s00211p00025860 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.B3... | 0.02 | Archaeplastida | |
| AT1G19850 | MP, IAA24, ARF5 | Transcriptional factor B3 family protein /... | 0.03 | Archaeplastida | |
| AT2G33860 | ARF3, ETT | Transcriptional factor B3 family protein /... | 0.04 | Archaeplastida | |
| AT5G20730 | TIR5, MSG1,... | Transcriptional factor B3 family protein /... | 0.02 | Archaeplastida | |
| AT5G60450 | ARF4 | auxin response factor 4 | 0.04 | Archaeplastida | |
| GSVIVT01004942001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.02 | Archaeplastida | |
| GSVIVT01011008001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.03 | Archaeplastida | |
| GSVIVT01020805001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.02 | Archaeplastida | |
| GSVIVT01021128001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.03 | Archaeplastida | |
| GSVIVT01021552001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.03 | Archaeplastida | |
| GSVIVT01025159001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.02 | Archaeplastida | |
| GSVIVT01025691001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.02 | Archaeplastida | |
| GSVIVT01035204001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.04 | Archaeplastida | |
| GSVIVT01035205001 | No alias | Auxin response factor 12 OS=Oryza sativa subsp. japonica | 0.04 | Archaeplastida | |
| Gb_12414 | No alias | transcription factor (ARF) | 0.02 | Archaeplastida | |
| Gb_17830 | No alias | transcription factor (ARF) | 0.01 | Archaeplastida | |
| Gb_23186 | No alias | transcription factor (ARF) | 0.02 | Archaeplastida | |
| Gb_23328 | No alias | transcription factor (ARF) | 0.01 | Archaeplastida | |
| Gb_31132 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
| Gb_32404 | No alias | transcription factor (ARF) | 0.01 | Archaeplastida | |
| Gb_32864 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
| Gb_39685 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
| Gb_39686 | No alias | transcription factor (ARF) | 0.06 | Archaeplastida | |
| LOC_Os01g48060.1 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
| LOC_Os02g06910.1 | No alias | transcription factor (ARF) | 0.01 | Archaeplastida | |
| LOC_Os02g35140.1 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
| LOC_Os04g56850.1 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
| LOC_Os04g57610.1 | No alias | transcription factor (ARF) | 0.02 | Archaeplastida | |
| LOC_Os05g43920.1 | No alias | transcription factor (ARF) | 0.05 | Archaeplastida | |
| LOC_Os05g48870.1 | No alias | transcription factor (ARF) | 0.01 | Archaeplastida | |
| LOC_Os08g40900.1 | No alias | transcription factor (ARF) | 0.01 | Archaeplastida | |
| LOC_Os10g33940.1 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
| LOC_Os11g32110.1 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
| LOC_Os12g41950.1 | No alias | transcription factor (ARF) | 0.02 | Archaeplastida | |
| MA_103763g0010 | No alias | Auxin response factor 6 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
| MA_69854g0010 | No alias | transcription factor (ARF) | 0.02 | Archaeplastida | |
| MA_85955g0010 | No alias | transcription factor (ARF) | 0.02 | Archaeplastida | |
| Pp3c13_4720V3.1 | No alias | auxin response factor 6 | 0.03 | Archaeplastida | |
| Pp3c1_40270V3.1 | No alias | auxin response factor 6 | 0.03 | Archaeplastida | |
| Pp3c26_11550V3.1 | No alias | auxin response factor 6 | 0.03 | Archaeplastida | |
| Pp3c6_21370V3.1 | No alias | auxin response factor 2 | 0.03 | Archaeplastida | |
| Solyc03g031970.4.1 | No alias | transcription factor (ARF) | 0.02 | Archaeplastida | |
| Solyc05g047460.3.1 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
| Solyc05g056040.3.1 | No alias | transcription factor (ARF) | 0.02 | Archaeplastida | |
| Solyc07g016180.3.1 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
| Solyc08g008380.4.1 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
| Solyc10g086130.3.1 | No alias | transcription factor (ARF) | 0.02 | Archaeplastida | |
| Zm00001e003229_P002 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
| Zm00001e006577_P003 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
| Zm00001e006640_P002 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
| Zm00001e014833_P002 | No alias | transcription factor (ARF) | 0.04 | Archaeplastida | |
| Zm00001e018126_P002 | No alias | transcription factor (ARF) | 0.04 | Archaeplastida | |
| Zm00001e020205_P004 | No alias | transcription factor (ARF) | 0.02 | Archaeplastida | |
| Zm00001e025163_P001 | No alias | transcription factor (ARF) | 0.02 | Archaeplastida | |
| Zm00001e028396_P001 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
| Zm00001e030325_P003 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
| Zm00001e032423_P002 | No alias | transcription factor (ARF) | 0.02 | Archaeplastida | |
| Zm00001e041866_P001 | No alias | transcription factor (ARF) | 0.04 | Archaeplastida | |
| Zm00001e041910_P003 | No alias | transcription factor (ARF) | 0.05 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000148 | 1,3-beta-D-glucan synthase complex | IEP | Neighborhood |
| MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
| BP | GO:0000271 | polysaccharide biosynthetic process | IEP | Neighborhood |
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003824 | catalytic activity | IEP | Neighborhood |
| MF | GO:0003843 | 1,3-beta-D-glucan synthase activity | IEP | Neighborhood |
| MF | GO:0004177 | aminopeptidase activity | IEP | Neighborhood |
| MF | GO:0004672 | protein kinase activity | IEP | Neighborhood |
| MF | GO:0005096 | GTPase activator activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| MF | GO:0005524 | ATP binding | IEP | Neighborhood |
| BP | GO:0006074 | (1->3)-beta-D-glucan metabolic process | IEP | Neighborhood |
| BP | GO:0006075 | (1->3)-beta-D-glucan biosynthetic process | IEP | Neighborhood |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0006464 | cellular protein modification process | IEP | Neighborhood |
| BP | GO:0006468 | protein phosphorylation | IEP | Neighborhood |
| BP | GO:0006793 | phosphorus metabolic process | IEP | Neighborhood |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Neighborhood |
| MF | GO:0008144 | drug binding | IEP | Neighborhood |
| MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | Neighborhood |
| MF | GO:0008374 | O-acyltransferase activity | IEP | Neighborhood |
| MF | GO:0008483 | transaminase activity | IEP | Neighborhood |
| BP | GO:0009250 | glucan biosynthetic process | IEP | Neighborhood |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| MF | GO:0015399 | primary active transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015405 | P-P-bond-hydrolysis-driven transmembrane transporter activity | IEP | Neighborhood |
| CC | GO:0016021 | integral component of membrane | IEP | Neighborhood |
| MF | GO:0016301 | kinase activity | IEP | Neighborhood |
| BP | GO:0016310 | phosphorylation | IEP | Neighborhood |
| BP | GO:0016458 | gene silencing | IEP | Neighborhood |
| MF | GO:0016462 | pyrophosphatase activity | IEP | Neighborhood |
| MF | GO:0016740 | transferase activity | IEP | Neighborhood |
| MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | Neighborhood |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Neighborhood |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Neighborhood |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Neighborhood |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Neighborhood |
| MF | GO:0016887 | ATPase activity | IEP | Neighborhood |
| MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
| MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Neighborhood |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
| BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
| MF | GO:0022804 | active transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0030145 | manganese ion binding | IEP | Neighborhood |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
| BP | GO:0031047 | gene silencing by RNA | IEP | Neighborhood |
| CC | GO:0031224 | intrinsic component of membrane | IEP | Neighborhood |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
| MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
| BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | Neighborhood |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
| MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
| BP | GO:0036211 | protein modification process | IEP | Neighborhood |
| MF | GO:0042623 | ATPase activity, coupled | IEP | Neighborhood |
| MF | GO:0042626 | ATPase activity, coupled to transmembrane movement of substances | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043168 | anion binding | IEP | Neighborhood |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0043412 | macromolecule modification | IEP | Neighborhood |
| MF | GO:0043492 | ATPase activity, coupled to movement of substances | IEP | Neighborhood |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Neighborhood |
| CC | GO:0044425 | membrane part | IEP | Neighborhood |
| BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0051273 | beta-glucan metabolic process | IEP | Neighborhood |
| BP | GO:0051274 | beta-glucan biosynthetic process | IEP | Neighborhood |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0065007 | biological regulation | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Neighborhood |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR033389 | AUX/IAA_dom | 534 | 575 |
| No external refs found! |