AT3G60490


Description : Integrase-type DNA-binding superfamily protein


Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000070 (SeedPlants) Phylogenetic Tree(s): OG_06_0000070_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G60490
Cluster HCCA: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00266920 evm_27.TU.AmTr_v1... External stimuli response.biotic... 0.03 Archaeplastida
AMTR_s00007p00268460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00009p00147970 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.07 Archaeplastida
AMTR_s00016p00238800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00040p00196580 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00068p00102110 evm_27.TU.AmTr_v1... External stimuli response.biotic... 0.03 Archaeplastida
AMTR_s00069p00132820 evm_27.TU.AmTr_v1... External stimuli response.biotic... 0.03 Archaeplastida
AMTR_s00115p00032780 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AT1G12610 DDF1 Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT1G44830 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT3G25890 No alias Integrase-type DNA-binding superfamily protein 0.06 Archaeplastida
AT4G13620 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT5G07310 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT5G13330 Rap2.6L related to AP2 6l 0.04 Archaeplastida
AT5G13910 LEP Integrase-type DNA-binding superfamily protein 0.12 Archaeplastida
AT5G18560 PUCHI Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT5G19790 RAP2.11 related to AP2 11 0.03 Archaeplastida
AT5G44210 ATERF-9, ERF9, ATERF9 erf domain protein 9 0.07 Archaeplastida
AT5G50080 ERF110 ethylene response factor 110 0.03 Archaeplastida
AT5G61890 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Cre14.g620500 No alias No description available 0.02 Archaeplastida
GSVIVT01018272001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01021146001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01028315001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.05 Archaeplastida
GSVIVT01032961001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.06 Archaeplastida
GSVIVT01032983001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
Gb_08437 No alias transcription factor (ERF) 0.02 Archaeplastida
Gb_23321 No alias transcription factor (ERF) 0.02 Archaeplastida
Gb_24891 No alias transcription factor (ERF) 0.02 Archaeplastida
Gb_26662 No alias transcription factor (ERF) 0.03 Archaeplastida
Gb_26863 No alias transcription factor (DREB) 0.03 Archaeplastida
Gb_29168 No alias Ethylene-responsive transcription factor ERF012... 0.03 Archaeplastida
Gb_32532 No alias transcription factor (ERF) 0.02 Archaeplastida
Gb_32995 No alias Ethylene-responsive transcription factor ERF016... 0.03 Archaeplastida
Gb_41020 No alias transcription factor (DREB) 0.04 Archaeplastida
LOC_Os01g64790.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os02g10760.1 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.02 Archaeplastida
LOC_Os02g32040.1 No alias transcription factor (ERF) 0.06 Archaeplastida
LOC_Os02g43970.1 No alias transcription factor (DREB) 0.06 Archaeplastida
LOC_Os02g54050.1 No alias Ethylene-responsive transcription factor ERF018... 0.03 Archaeplastida
LOC_Os04g46220.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os06g36000.1 No alias transcription factor (DREB) 0.02 Archaeplastida
LOC_Os08g07700.1 No alias Ethylene-responsive transcription factor ERF087... 0.03 Archaeplastida
LOC_Os08g44960.1 No alias transcription factor (ERF) 0.05 Archaeplastida
MA_10031781g0010 No alias transcription factor (ERF) 0.06 Archaeplastida
MA_10266433g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_10434489g0020 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_135279g0010 No alias transcription factor (ERF) 0.05 Archaeplastida
MA_166248g0020 No alias transcription factor (ERF) 0.04 Archaeplastida
MA_17001g0020 No alias transcription factor (DREB) 0.04 Archaeplastida
MA_180106g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_203191g0010 No alias transcription factor (ERF) 0.04 Archaeplastida
MA_428433g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_442451g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_4481564g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_54341g0010 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.03 Archaeplastida
MA_8574268g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_94228g0010 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.04 Archaeplastida
MA_9588449g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_9905g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
Mp6g04880.1 No alias Ethylene-responsive transcription factor ERF008... 0.03 Archaeplastida
Pp3c10_7030V3.1 No alias Integrase-type DNA-binding superfamily protein 0.06 Archaeplastida
Pp3c3_33930V3.1 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c8_7340V3.1 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Smo104980 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
Smo409196 No alias External stimuli response.biotic... 0.02 Archaeplastida
Solyc01g005630.3.1 No alias transcription factor (ERF). transcription factor (ERN1) 0.03 Archaeplastida
Solyc03g005500.1.1 No alias transcription factor (ERF). transcription factor (DREB) 0.03 Archaeplastida
Solyc03g117130.3.1 No alias transcription factor (ERF) 0.04 Archaeplastida
Solyc03g118190.4.1 No alias transcription factor (ERF) 0.06 Archaeplastida
Solyc05g052410.3.1 No alias transcription factor (DREB) 0.04 Archaeplastida
Solyc06g065820.3.1 No alias transcription factor (ERF) 0.05 Archaeplastida
Solyc06g068360.3.1 No alias transcription factor (ERF) 0.05 Archaeplastida
Solyc06g068830.2.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc09g066350.1.1 No alias transcription factor (ERF) 0.04 Archaeplastida
Solyc09g089910.1.1 No alias transcription factor (ERF). transcription factor (DREB) 0.03 Archaeplastida
Solyc11g011750.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc12g056980.1.1 No alias transcription factor (DREB) 0.04 Archaeplastida
Zm00001e000609_P001 No alias transcription factor (ERF) 0.06 Archaeplastida
Zm00001e000611_P001 No alias Ethylene-responsive transcription factor ERF073... 0.02 Archaeplastida
Zm00001e001139_P001 No alias Ethylene-responsive transcription factor ERF014... 0.04 Archaeplastida
Zm00001e003061_P001 No alias transcription factor (ERF). transcription factor (ERN1) 0.06 Archaeplastida
Zm00001e016064_P001 No alias transcription factor (ERF) 0.04 Archaeplastida
Zm00001e019837_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e021331_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e023686_P001 No alias transcription factor (ERF) 0.07 Archaeplastida
Zm00001e025840_P001 No alias transcription factor (DREB) 0.05 Archaeplastida
Zm00001e033541_P001 No alias transcription factor (ERF) 0.04 Archaeplastida
Zm00001e034661_P001 No alias Ethylene-responsive transcription factor ERF115... 0.04 Archaeplastida
Zm00001e036130_P001 No alias transcription factor (DREB) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated ISS Interproscan
Type GO Term Name Evidence Source
BP GO:0000741 karyogamy IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
BP GO:0006568 tryptophan metabolic process IEP Neighborhood
BP GO:0006569 tryptophan catabolic process IEP Neighborhood
BP GO:0006586 indolalkylamine metabolic process IEP Neighborhood
BP GO:0009074 aromatic amino acid family catabolic process IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0009310 amine catabolic process IEP Neighborhood
BP GO:0009683 indoleacetic acid metabolic process IEP Neighborhood
BP GO:0009684 indoleacetic acid biosynthetic process IEP Neighborhood
BP GO:0009690 cytokinin metabolic process IEP Neighborhood
BP GO:0009804 coumarin metabolic process IEP Neighborhood
BP GO:0009805 coumarin biosynthetic process IEP Neighborhood
BP GO:0010197 polar nucleus fusion IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEP Neighborhood
BP GO:0034754 cellular hormone metabolic process IEP Neighborhood
BP GO:0042402 cellular biogenic amine catabolic process IEP Neighborhood
BP GO:0042436 indole-containing compound catabolic process IEP Neighborhood
BP GO:0042445 hormone metabolic process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0046218 indolalkylamine catabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0048284 organelle fusion IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 70 119
No external refs found!