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  5. AT1G16440

AT1G16440 (RSH3)


Aliases : RSH3

Description : root hair specific 3


Gene families : OG0000079 (Archaeplastida) Phylogenetic Tree(s): OG0000079_tree ,
OG_05_0000117 (LandPlants) Phylogenetic Tree(s): OG_05_0000117_tree ,
OG_06_0000184 (SeedPlants) Phylogenetic Tree(s): OG_06_0000184_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G16440
Cluster HCCA: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00229200 evm_27.TU.AmTr_v1... Protein modification.phosphorylation.AGC kinase... 0.03 Archaeplastida
AMTR_s00068p00198560 evm_27.TU.AmTr_v1... Protein modification.phosphorylation.AGC kinase... 0.05 Archaeplastida
AMTR_s00111p00126010 evm_27.TU.AmTr_v1... Protein modification.phosphorylation.AGC kinase... 0.03 Archaeplastida
AT1G53700 WAG1, PK3AT WAG 1 0.07 Archaeplastida
AT1G79250 AGC1.7 AGC kinase 1.7 0.04 Archaeplastida
AT2G34650 PID, ABR Protein kinase superfamily protein 0.02 Archaeplastida
AT3G12690 AGC1.5 AGC kinase 1.5 0.03 Archaeplastida
AT3G14370 WAG2 Protein kinase superfamily protein 0.06 Archaeplastida
AT3G20830 No alias AGC (cAMP-dependent, cGMP-dependent and protein kinase... 0.05 Archaeplastida
GSVIVT01021582001 No alias Protein modification.phosphorylation.AGC kinase... 0.02 Archaeplastida
GSVIVT01036690001 No alias Protein modification.phosphorylation.AGC kinase... 0.09 Archaeplastida
Gb_01458 No alias protein kinase (AGC-VIII) 0.02 Archaeplastida
Gb_17384 No alias protein kinase (AGC-VIII) 0.03 Archaeplastida
Gb_21156 No alias PINOID auxin transport regulator kinase. protein kinase... 0.02 Archaeplastida
Gb_29226 No alias protein kinase (AGC-VIII) 0.03 Archaeplastida
Gb_41169 No alias Serine/threonine-protein kinase OXI1 OS=Arabidopsis... 0.05 Archaeplastida
LOC_Os01g13270.1 No alias protein kinase (AGC-VIII) 0.05 Archaeplastida
LOC_Os02g18430.1 No alias protein kinase (AGC-VIII) 0.11 Archaeplastida
LOC_Os03g44020.1 No alias PINOID auxin transport regulator kinase. protein kinase... 0.02 Archaeplastida
LOC_Os04g46180.1 No alias protein kinase (AGC-VIII). Prgrammed Cell Death... 0.02 Archaeplastida
LOC_Os05g14750.1 No alias protein kinase (AGC-VIII) 0.06 Archaeplastida
LOC_Os08g39460.1 No alias protein kinase (AGC-VIII) 0.07 Archaeplastida
MA_10436591g0010 No alias Serine/threonine-protein kinase OXI1 OS=Arabidopsis... 0.03 Archaeplastida
MA_178953g0010 No alias phototropin light receptor. phototropin photoreceptor 0.02 Archaeplastida
MA_432105g0010 No alias protein kinase (AGC-VIII) 0.04 Archaeplastida
MA_4817656g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_55799g0010 No alias Serine/threonine-protein kinase UCNL OS=Arabidopsis... 0.02 Archaeplastida
MA_849767g0010 No alias Protein kinase PVPK-1 OS=Phaseolus vulgaris... 0.03 Archaeplastida
MA_89422g0010 No alias PINOID auxin transport regulator kinase. protein kinase... 0.04 Archaeplastida
Mp8g05020.1 No alias Phototropin-1A OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Mp8g16840.1 No alias protein kinase (AGC-VIII) 0.02 Archaeplastida
Mpzg01290.1 No alias Serine/threonine-protein kinase D6PKL2 OS=Arabidopsis... 0.01 Archaeplastida
Pp3c15_20280V3.1 No alias D6 protein kinase like 2 0.02 Archaeplastida
Pp3c15_24770V3.1 No alias D6 protein kinase like 2 0.03 Archaeplastida
Solyc02g067830.3.1 No alias protein kinase (AGC-VIII) 0.03 Archaeplastida
Solyc09g056430.4.1 No alias protein kinase (AGC-VIII) 0.03 Archaeplastida
Solyc11g072710.3.1 No alias phototropin light receptor. phototropin photoreceptor 0.02 Archaeplastida
Solyc12g017390.3.1 No alias protein kinase (AGC-VIII) 0.04 Archaeplastida
Zm00001e003235_P001 No alias PINOID auxin transport regulator kinase. protein kinase... 0.03 Archaeplastida
Zm00001e003514_P001 No alias protein kinase (AGC-VIII) 0.04 Archaeplastida
Zm00001e007746_P001 No alias protein kinase (AGC-VIII) 0.03 Archaeplastida
Zm00001e010027_P001 No alias protein kinase (AGC-VIII) 0.02 Archaeplastida
Zm00001e014132_P001 No alias protein kinase (AGC-VIII) 0.06 Archaeplastida
Zm00001e016381_P001 No alias protein kinase (AGC-VIII) 0.04 Archaeplastida
Zm00001e016743_P001 No alias PINOID auxin transport regulator kinase. protein kinase... 0.03 Archaeplastida
Zm00001e017799_P001 No alias protein kinase (AGC-VIII) 0.02 Archaeplastida
Zm00001e027147_P001 No alias protein kinase (AGC-VIII) 0.07 Archaeplastida
Zm00001e031307_P001 No alias protein kinase (AGC-VIII) 0.05 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005886 plasma membrane IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
MF GO:0016301 kinase activity ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
BP GO:0000902 cell morphogenesis IEP Neighborhood
BP GO:0002238 response to molecule of fungal origin IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005381 iron ion transmembrane transporter activity IEP Neighborhood
MF GO:0005385 zinc ion transmembrane transporter activity IEP Neighborhood
MF GO:0005548 phospholipid transporter activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006826 iron ion transport IEP Neighborhood
BP GO:0006829 zinc ion transport IEP Neighborhood
BP GO:0007154 cell communication IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
MF GO:0008493 tetracycline transmembrane transporter activity IEP Neighborhood
MF GO:0008526 phosphatidylinositol transporter activity IEP Neighborhood
MF GO:0008553 proton-exporting ATPase activity, phosphorylative mechanism IEP Neighborhood
BP GO:0009267 cellular response to starvation IEP Neighborhood
CC GO:0009505 plant-type cell wall IEP Neighborhood
CC GO:0009531 secondary cell wall IEP Neighborhood
BP GO:0009653 anatomical structure morphogenesis IEP Neighborhood
BP GO:0009664 plant-type cell wall organization IEP Neighborhood
BP GO:0009698 phenylpropanoid metabolic process IEP Neighborhood
BP GO:0009808 lignin metabolic process IEP Neighborhood
BP GO:0009826 unidimensional cell growth IEP Neighborhood
BP GO:0009828 plant-type cell wall loosening IEP Neighborhood
BP GO:0009831 plant-type cell wall modification involved in multidimensional cell growth IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0009991 response to extracellular stimulus IEP Neighborhood
BP GO:0010053 root epidermal cell differentiation IEP Neighborhood
BP GO:0010054 trichoblast differentiation IEP Neighborhood
BP GO:0010106 cellular response to iron ion starvation IEP Neighborhood
BP GO:0010167 response to nitrate IEP Neighborhood
BP GO:0010383 cell wall polysaccharide metabolic process IEP Neighborhood
BP GO:0010410 hemicellulose metabolic process IEP Neighborhood
BP GO:0010411 xyloglucan metabolic process IEP Neighborhood
BP GO:0010413 glucuronoxylan metabolic process IEP Neighborhood
BP GO:0010466 negative regulation of peptidase activity IEP Neighborhood
BP GO:0010951 negative regulation of endopeptidase activity IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
MF GO:0015665 alcohol transmembrane transporter activity IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
BP GO:0015706 nitrate transport IEP Neighborhood
BP GO:0016049 cell growth IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
BP GO:0021700 developmental maturation IEP Neighborhood
BP GO:0030154 cell differentiation IEP Neighborhood
BP GO:0030162 regulation of proteolysis IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0031667 response to nutrient levels IEP Neighborhood
BP GO:0031668 cellular response to extracellular stimulus IEP Neighborhood
BP GO:0031669 cellular response to nutrient levels IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0032989 cellular component morphogenesis IEP Neighborhood
BP GO:0035864 response to potassium ion IEP Neighborhood
BP GO:0035865 cellular response to potassium ion IEP Neighborhood
MF GO:0036442 proton-exporting ATPase activity IEP Neighborhood
BP GO:0040007 growth IEP Neighborhood
BP GO:0042547 cell wall modification involved in multidimensional cell growth IEP Neighborhood
BP GO:0042594 response to starvation IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
MF GO:0042895 antibiotic transmembrane transporter activity IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044038 cell wall macromolecule biosynthetic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0045491 xylan metabolic process IEP Neighborhood
BP GO:0045492 xylan biosynthetic process IEP Neighborhood
BP GO:0045861 negative regulation of proteolysis IEP Neighborhood
BP GO:0048364 root development IEP Neighborhood
BP GO:0048469 cell maturation IEP Neighborhood
BP GO:0048527 lateral root development IEP Neighborhood
BP GO:0048528 post-embryonic root development IEP Neighborhood
BP GO:0048588 developmental cell growth IEP Neighborhood
BP GO:0048589 developmental growth IEP Neighborhood
BP GO:0048764 trichoblast maturation IEP Neighborhood
BP GO:0048765 root hair cell differentiation IEP Neighborhood
BP GO:0048766 root hair initiation IEP Neighborhood
BP GO:0048767 root hair elongation IEP Neighborhood
BP GO:0048768 root hair cell tip growth IEP Neighborhood
BP GO:0048869 cellular developmental process IEP Neighborhood
BP GO:0051346 negative regulation of hydrolase activity IEP Neighborhood
BP GO:0052547 regulation of peptidase activity IEP Neighborhood
BP GO:0052548 regulation of endopeptidase activity IEP Neighborhood
BP GO:0055062 phosphate ion homeostasis IEP Neighborhood
BP GO:0055083 monovalent inorganic anion homeostasis IEP Neighborhood
BP GO:0060560 developmental growth involved in morphogenesis IEP Neighborhood
BP GO:0070589 cellular component macromolecule biosynthetic process IEP Neighborhood
BP GO:0070592 cell wall polysaccharide biosynthetic process IEP Neighborhood
BP GO:0071365 cellular response to auxin stimulus IEP Neighborhood
BP GO:0071496 cellular response to external stimulus IEP Neighborhood
BP GO:0071695 anatomical structure maturation IEP Neighborhood
BP GO:0072506 trivalent inorganic anion homeostasis IEP Neighborhood
MF GO:0072509 divalent inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0072732 cellular response to calcium ion starvation IEP Neighborhood
BP GO:0090627 plant epidermal cell differentiation IEP Neighborhood
BP GO:0090696 post-embryonic plant organ development IEP Neighborhood
BP GO:0099402 plant organ development IEP Neighborhood
InterPro domains Description Start Stop
IPR000719 Prot_kinase_dom 114 269
IPR000719 Prot_kinase_dom 332 436
No external refs found!