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  5. Mp2g12350.1

Mp2g12350.1


Description : Calmodulin-interacting protein 111 OS=Arabidopsis thaliana (sp|q9let7|ci111_arath : 393.0)


Gene families : OG0000169 (Archaeplastida) Phylogenetic Tree(s): OG0000169_tree ,
OG_05_0006701 (LandPlants) Phylogenetic Tree(s): OG_05_0006701_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp2g12350.1
Cluster HCCA: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00152530 evm_27.TU.AmTr_v1... Protein translocation.peroxisome.importomer... 0.02 Archaeplastida
AMTR_s00040p00198390 evm_27.TU.AmTr_v1... Calmodulin-interacting protein 111 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00049p00071550 evm_27.TU.AmTr_v1... Cell division control protein 48 homolog C... 0.02 Archaeplastida
AMTR_s00072p00117380 evm_27.TU.AmTr_v1... Cell division control protein 48 homolog D... 0.03 Archaeplastida
AMTR_s00085p00052820 evm_27.TU.AmTr_v1... Cell division cycle protein 48 homolog OS=Glycine max 0.02 Archaeplastida
AMTR_s00095p00091650 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AT3G09840 CDC48A, CDC48, ATCDC48 cell division cycle 48 0.03 Archaeplastida
Cpa|evm.model.tig00021463.10 No alias Cell division control protein 48 homolog D... 0.01 Archaeplastida
GSVIVT01007689001 No alias Cell division cycle protein 48 homolog OS=Glycine max 0.03 Archaeplastida
GSVIVT01010343001 No alias Cell division control protein 48 homolog C... 0.06 Archaeplastida
Gb_26929 No alias component Pex6 of Pex1-Pex6 subcomplex 0.02 Archaeplastida
LOC_Os04g52690.3 No alias component Pex6 of Pex1-Pex6 subcomplex 0.04 Archaeplastida
LOC_Os06g01980.1 No alias Cell division control protein 48 homolog C... 0.02 Archaeplastida
MA_10431342g0010 No alias Calmodulin-interacting protein 111 OS=Arabidopsis... 0.02 Archaeplastida
MA_26837g0010 No alias Calmodulin-interacting protein 111 OS=Arabidopsis... 0.02 Archaeplastida
Pp3c17_21090V3.1 No alias peroxin 6 0.04 Archaeplastida
Smo115678 No alias Protein translocation.peroxisome.importomer... 0.02 Archaeplastida
Solyc06g074980.3.1 No alias platform ATPase (CDC48) 0.02 Archaeplastida
Solyc11g069720.2.1 No alias platform ATPase (CDC48) 0.03 Archaeplastida
Zm00001e021405_P001 No alias Calmodulin-interacting protein 111 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e022089_P003 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e036688_P001 No alias Cell division control protein 48 homolog C... 0.02 Archaeplastida
Zm00001e041158_P001 No alias Cell division control protein 48 homolog B... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Neighborhood
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005681 spliceosomal complex IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
BP GO:0006476 protein deacetylation IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006914 autophagy IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016575 histone deacetylation IEP Neighborhood
MF GO:0017025 TBP-class protein binding IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019439 aromatic compound catabolic process IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034655 nucleobase-containing compound catabolic process IEP Neighborhood
BP GO:0035601 protein deacylation IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
BP GO:0044270 cellular nitrogen compound catabolic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0046700 heterocycle catabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Neighborhood
BP GO:0061919 process utilizing autophagic mechanism IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:0098732 macromolecule deacylation IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901361 organic cyclic compound catabolic process IEP Neighborhood
CC GO:1902554 serine/threonine protein kinase complex IEP Neighborhood
CC GO:1902911 protein kinase complex IEP Neighborhood
CC GO:1990316 Atg1/ULK1 kinase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR031996 NVL2_nucleolin-bd 24 85
IPR003959 ATPase_AAA_core 885 1014
IPR003959 ATPase_AAA_core 521 665
No external refs found!