AT3G61460 (BRH1)

Aliases : BRH1

Description : brassinosteroid-responsive RING-H2

Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000175 (LandPlants) Phylogenetic Tree(s): OG_05_0000175_tree ,
OG_06_0000116 (SeedPlants) Phylogenetic Tree(s): OG_06_0000116_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G61460
Cluster	HCCA: Cluster_249

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00088p00040490	evm_27.TU.AmTr_v1...	Protein degradation.peptide tagging.Ubiquitin...	0.03	Archaeplastida
AT1G72220	No alias	RING/U-box superfamily protein	0.03	Archaeplastida
AT4G35480	RHA3B	RING-H2 finger A3B	0.05	Archaeplastida
AT5G07040	No alias	RING/U-box superfamily protein	0.04	Archaeplastida
AT5G41400	No alias	RING/U-box superfamily protein	0.05	Archaeplastida
GSVIVT01009096001	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.03	Archaeplastida
Gb_23066	No alias	no hits & (original description: none)	0.02	Archaeplastida
Gb_28973	No alias	Probable E3 ubiquitin-protein ligase RHA1A...	0.02	Archaeplastida
Gb_28980	No alias	no hits & (original description: none)	0.02	Archaeplastida
Gb_32878	No alias	RING-H2-class E3 ligase	0.04	Archaeplastida
Gb_33929	No alias	RING-H2-class E3 ligase	0.04	Archaeplastida
Gb_33932	No alias	RING-H2-class E3 ligase	0.04	Archaeplastida
LOC_Os01g55110.1	No alias	RING-H2-class E3 ligase	0.03	Archaeplastida
LOC_Os01g61470.1	No alias	RING-H2-class E3 ligase	0.03	Archaeplastida
LOC_Os02g46600.1	No alias	RING-H2-class E3 ligase	0.03	Archaeplastida
LOC_Os03g44636.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os05g07140.1	No alias	RING-H2-class E3 ligase	0.04	Archaeplastida
LOC_Os06g07100.2	No alias	RING-H2-class E3 ligase	0.04	Archaeplastida
LOC_Os08g37760.1	No alias	RING-H2-class E3 ligase	0.04	Archaeplastida
LOC_Os11g02424.1	No alias	RING-H2 finger protein ATL74 OS=Arabidopsis thaliana...	0.04	Archaeplastida
LOC_Os12g02210.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os12g24530.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_10021g0010	No alias	RING-H2-class E3 ligase	0.03	Archaeplastida
MA_10435495g0010	No alias	RING-H2-class E3 ligase	0.02	Archaeplastida
MA_181940g0010	No alias	RING-H2-class E3 ligase	0.05	Archaeplastida
MA_2159g0010	No alias	RING-H2 finger protein ATL78 OS=Arabidopsis thaliana...	0.03	Archaeplastida
MA_289646g0010	No alias	E3 ubiquitin-protein ligase ATL23 OS=Arabidopsis...	0.03	Archaeplastida
MA_373963g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_46635g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_895676g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
Mp6g19130.1	No alias	no hits & (original description: none)	0.02	Archaeplastida
Mp8g15250.1	No alias	RING-H2-class E3 ligase	0.02	Archaeplastida
Pp3c18_5860V3.1	No alias	RING/U-box superfamily protein	0.02	Archaeplastida
Pp3c23_10580V3.1	No alias	RING/U-box superfamily protein	0.03	Archaeplastida
Pp3c23_1651V3.1	No alias	RING/U-box superfamily protein	0.03	Archaeplastida
Smo412606	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.03	Archaeplastida
Solyc02g068415.1.1	No alias	RING-H2 finger protein ATL73 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Solyc02g082420.3.1	No alias	RING-H2-class E3 ligase	0.05	Archaeplastida
Solyc03g033330.3.1	No alias	NEP1-interacting protein 1 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Solyc06g150136.1.1	No alias	RING-H2-class E3 ligase	0.03	Archaeplastida
Solyc08g008080.1.1	No alias	E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis...	0.04	Archaeplastida
Solyc08g081370.1.1	No alias	E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis...	0.04	Archaeplastida
Solyc10g009487.1.1	No alias	RING-H2 finger protein ATL20 OS=Arabidopsis thaliana...	0.05	Archaeplastida
Solyc11g005290.1.1	No alias	RING-H2-class E3 ligase	0.05	Archaeplastida
Solyc12g087840.1.1	No alias	RING-H2-class E3 ligase	0.05	Archaeplastida
Zm00001e007956_P001	No alias	RING-H2-class E3 ligase	0.02	Archaeplastida
Zm00001e008560_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e015805_P001	No alias	NEP1-interacting protein-like 2 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Zm00001e016474_P001	No alias	RING-H2-class E3 ligase	0.02	Archaeplastida
Zm00001e032838_P001	No alias	RING-H2-class E3 ligase	0.04	Archaeplastida
Zm00001e036289_P001	No alias	no hits & (original description: none)	0.07	Archaeplastida
Zm00001e038229_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e039314_P001	No alias	RING-H2-class E3 ligase	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006812	cation transport	None	Extended
BP	GO:0006873	cellular ion homeostasis	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	ISS	Interproscan
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009741	response to brassinosteroid	IEP	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010200	response to chitin	IEP	Interproscan
BP	GO:0010243	response to organonitrogen compound	None	Extended
BP	GO:0014070	response to organic cyclic compound	None	Extended
BP	GO:0019725	cellular homeostasis	None	Extended
BP	GO:0030001	metal ion transport	None	Extended
BP	GO:0030003	cellular cation homeostasis	RCA	Interproscan
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042493	response to drug	None	Extended
BP	GO:0042592	homeostatic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0048878	chemical homeostasis	None	Extended
BP	GO:0050801	ion homeostasis	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055080	cation homeostasis	None	Extended
BP	GO:0055082	cellular chemical homeostasis	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0070838	divalent metal ion transport	RCA	Interproscan
BP	GO:0072511	divalent inorganic cation transport	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000210	NAD+ diphosphatase activity	IEP	Neighborhood
MF	GO:0004551	nucleotide diphosphatase activity	IEP	Neighborhood
MF	GO:0005102	signaling receptor binding	IEP	Neighborhood
BP	GO:0006195	purine nucleotide catabolic process	IEP	Neighborhood
BP	GO:0006473	protein acetylation	IEP	Neighborhood
BP	GO:0006595	polyamine metabolic process	IEP	Neighborhood
BP	GO:0006598	polyamine catabolic process	IEP	Neighborhood
BP	GO:0006714	sesquiterpenoid metabolic process	IEP	Neighborhood
MF	GO:0008171	O-methyltransferase activity	IEP	Neighborhood
MF	GO:0008893	guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity	IEP	Neighborhood
BP	GO:0009154	purine ribonucleotide catabolic process	IEP	Neighborhood
BP	GO:0009261	ribonucleotide catabolic process	IEP	Neighborhood
CC	GO:0009503	thylakoid light-harvesting complex	IEP	Neighborhood
CC	GO:0009517	PSII associated light-harvesting complex II	IEP	Neighborhood
BP	GO:0009687	abscisic acid metabolic process	IEP	Neighborhood
BP	GO:0009688	abscisic acid biosynthetic process	IEP	Neighborhood
BP	GO:0009733	response to auxin	IEP	Neighborhood
BP	GO:0009804	coumarin metabolic process	IEP	Neighborhood
BP	GO:0009805	coumarin biosynthetic process	IEP	Neighborhood
BP	GO:0009809	lignin biosynthetic process	IEP	Neighborhood
BP	GO:0009834	plant-type secondary cell wall biogenesis	IEP	Neighborhood
BP	GO:0010117	photoprotection	IEP	Neighborhood
BP	GO:0010383	cell wall polysaccharide metabolic process	IEP	Neighborhood
BP	GO:0010410	hemicellulose metabolic process	IEP	Neighborhood
BP	GO:0010413	glucuronoxylan metabolic process	IEP	Neighborhood
BP	GO:0010417	glucuronoxylan biosynthetic process	IEP	Neighborhood
MF	GO:0010945	CoA pyrophosphatase activity	IEP	Neighborhood
MF	GO:0015020	glucuronosyltransferase activity	IEP	Neighborhood
BP	GO:0015936	coenzyme A metabolic process	IEP	Neighborhood
BP	GO:0015937	coenzyme A biosynthetic process	IEP	Neighborhood
BP	GO:0016106	sesquiterpenoid biosynthetic process	IEP	Neighborhood
BP	GO:0016122	xanthophyll metabolic process	IEP	Neighborhood
MF	GO:0016794	diphosphoric monoester hydrolase activity	IEP	Neighborhood
CC	GO:0030076	light-harvesting complex	IEP	Neighborhood
MF	GO:0030744	luteolin O-methyltransferase activity	IEP	Neighborhood
MF	GO:0030755	quercetin 3-O-methyltransferase activity	IEP	Neighborhood
BP	GO:0032879	regulation of localization	IEP	Neighborhood
BP	GO:0032928	regulation of superoxide anion generation	IEP	Neighborhood
MF	GO:0033612	receptor serine/threonine kinase binding	IEP	Neighborhood
MF	GO:0033799	myricetin 3'-O-methyltransferase activity	IEP	Neighborhood
BP	GO:0033866	nucleoside bisphosphate biosynthetic process	IEP	Neighborhood
BP	GO:0033869	nucleoside bisphosphate catabolic process	IEP	Neighborhood
BP	GO:0034030	ribonucleoside bisphosphate biosynthetic process	IEP	Neighborhood
BP	GO:0034031	ribonucleoside bisphosphate catabolic process	IEP	Neighborhood
BP	GO:0034033	purine nucleoside bisphosphate biosynthetic process	IEP	Neighborhood
BP	GO:0034034	purine nucleoside bisphosphate catabolic process	IEP	Neighborhood
BP	GO:0042398	cellular modified amino acid biosynthetic process	IEP	Neighborhood
BP	GO:0043288	apocarotenoid metabolic process	IEP	Neighborhood
BP	GO:0043289	apocarotenoid biosynthetic process	IEP	Neighborhood
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	Neighborhood
BP	GO:0044038	cell wall macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0044273	sulfur compound catabolic process	IEP	Neighborhood
BP	GO:0045491	xylan metabolic process	IEP	Neighborhood
BP	GO:0045492	xylan biosynthetic process	IEP	Neighborhood
MF	GO:0047763	caffeate O-methyltransferase activity	IEP	Neighborhood
BP	GO:0050789	regulation of biological process	IEP	Neighborhood
BP	GO:0051049	regulation of transport	IEP	Neighborhood
BP	GO:0051552	flavone metabolic process	IEP	Neighborhood
BP	GO:0051553	flavone biosynthetic process	IEP	Neighborhood
BP	GO:0051554	flavonol metabolic process	IEP	Neighborhood
BP	GO:0051555	flavonol biosynthetic process	IEP	Neighborhood
BP	GO:0070589	cellular component macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0070592	cell wall polysaccharide biosynthetic process	IEP	Neighborhood
BP	GO:0072523	purine-containing compound catabolic process	IEP	Neighborhood
BP	GO:0090322	regulation of superoxide metabolic process	IEP	Neighborhood
CC	GO:0098807	chloroplast thylakoid membrane protein complex	IEP	Neighborhood
BP	GO:1901136	carbohydrate derivative catabolic process	IEP	Neighborhood
BP	GO:1902644	tertiary alcohol metabolic process	IEP	Neighborhood
BP	GO:1902645	tertiary alcohol biosynthetic process	IEP	Neighborhood
BP	GO:2001293	malonyl-CoA metabolic process	IEP	Neighborhood
BP	GO:2001294	malonyl-CoA catabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001841	Znf_RING	93	137

External Links

No external refs found!

AT3G61460 (BRH1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation