AT3G61790


Description : Protein with RING/U-box and TRAF-like domains


Gene families : OG0000967 (Archaeplastida) Phylogenetic Tree(s): OG0000967_tree ,
OG_05_0000653 (LandPlants) Phylogenetic Tree(s): OG_05_0000653_tree ,
OG_06_0000482 (SeedPlants) Phylogenetic Tree(s): OG_06_0000482_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G61790
Cluster HCCA: Cluster_212

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01000648001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Mp3g21220.1 No alias SINA-class E3 ligase 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process ISS Interproscan
BP GO:0007275 multicellular organism development ISS Interproscan
Type GO Term Name Evidence Source
BP GO:0000303 response to superoxide IEP Neighborhood
BP GO:0000305 response to oxygen radical IEP Neighborhood
BP GO:0001944 vasculature development IEP Neighborhood
MF GO:0004557 alpha-galactosidase activity IEP Neighborhood
MF GO:0004607 phosphatidylcholine-sterol O-acyltransferase activity IEP Neighborhood
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
MF GO:0004707 MAP kinase activity IEP Neighborhood
MF GO:0005249 voltage-gated potassium channel activity IEP Neighborhood
MF GO:0005261 cation channel activity IEP Neighborhood
MF GO:0005267 potassium channel activity IEP Neighborhood
MF GO:0005484 SNAP receptor activity IEP Neighborhood
CC GO:0005773 vacuole IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006623 protein targeting to vacuole IEP Neighborhood
BP GO:0006625 protein targeting to peroxisome IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006635 fatty acid beta-oxidation IEP Neighborhood
BP GO:0006644 phospholipid metabolic process IEP Neighborhood
BP GO:0006650 glycerophospholipid metabolic process IEP Neighborhood
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Neighborhood
BP GO:0006672 ceramide metabolic process IEP Neighborhood
BP GO:0006677 glycosylceramide metabolic process IEP Neighborhood
BP GO:0006687 glycosphingolipid metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
BP GO:0006858 extracellular transport IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0007030 Golgi organization IEP Neighborhood
BP GO:0007031 peroxisome organization IEP Neighborhood
BP GO:0007033 vacuole organization IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
CC GO:0008076 voltage-gated potassium channel complex IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008374 O-acyltransferase activity IEP Neighborhood
MF GO:0008477 purine nucleosidase activity IEP Neighborhood
MF GO:0008930 methylthioadenosine nucleosidase activity IEP Neighborhood
MF GO:0009044 xylan 1,4-beta-xylosidase activity IEP Neighborhood
BP GO:0009062 fatty acid catabolic process IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
BP GO:0009395 phospholipid catabolic process IEP Neighborhood
BP GO:0009696 salicylic acid metabolic process IEP Neighborhood
BP GO:0009697 salicylic acid biosynthetic process IEP Neighborhood
BP GO:0010104 regulation of ethylene-activated signaling pathway IEP Neighborhood
BP GO:0010105 negative regulation of ethylene-activated signaling pathway IEP Neighborhood
BP GO:0010167 response to nitrate IEP Neighborhood
BP GO:0010260 animal organ senescence IEP Neighborhood
BP GO:0010374 stomatal complex development IEP Neighborhood
BP GO:0014070 response to organic cyclic compound IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
BP GO:0015706 nitrate transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0015919 peroxisomal membrane transport IEP Neighborhood
MF GO:0015925 galactosidase activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016042 lipid catabolic process IEP Neighborhood
BP GO:0016137 glycoside metabolic process IEP Neighborhood
BP GO:0016139 glycoside catabolic process IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
BP GO:0016197 endosomal transport IEP Neighborhood
BP GO:0016558 protein import into peroxisome matrix IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
BP GO:0018958 phenol-containing compound metabolic process IEP Neighborhood
CC GO:0019005 SCF ubiquitin ligase complex IEP Neighborhood
BP GO:0019377 glycolipid catabolic process IEP Neighborhood
BP GO:0019395 fatty acid oxidation IEP Neighborhood
BP GO:0019509 L-methionine salvage from methylthioadenosine IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0022843 voltage-gated cation channel activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0030149 sphingolipid catabolic process IEP Neighborhood
BP GO:0030258 lipid modification IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034440 lipid oxidation IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
CC GO:0034702 ion channel complex IEP Neighborhood
CC GO:0034703 cation channel complex IEP Neighborhood
CC GO:0034705 potassium channel complex IEP Neighborhood
BP GO:0042537 benzene-containing compound metabolic process IEP Neighborhood
MF GO:0042562 hormone binding IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0043094 cellular metabolic compound salvage IEP Neighborhood
BP GO:0043102 amino acid salvage IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0043574 peroxisomal transport IEP Neighborhood
BP GO:0044242 cellular lipid catabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044743 protein transmembrane import into intracellular organelle IEP Neighborhood
BP GO:0045017 glycerolipid biosynthetic process IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0045493 xylan catabolic process IEP Neighborhood
BP GO:0046189 phenol-containing compound biosynthetic process IEP Neighborhood
BP GO:0046434 organophosphate catabolic process IEP Neighborhood
BP GO:0046466 membrane lipid catabolic process IEP Neighborhood
BP GO:0046474 glycerophospholipid biosynthetic process IEP Neighborhood
BP GO:0046477 glycosylceramide catabolic process IEP Neighborhood
BP GO:0046479 glycosphingolipid catabolic process IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
BP GO:0046514 ceramide catabolic process IEP Neighborhood
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0048585 negative regulation of response to stimulus IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
MF GO:0051740 ethylene binding IEP Neighborhood
BP GO:0065002 intracellular protein transmembrane transport IEP Neighborhood
BP GO:0070297 regulation of phosphorelay signal transduction system IEP Neighborhood
BP GO:0070298 negative regulation of phosphorelay signal transduction system IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0071265 L-methionine biosynthetic process IEP Neighborhood
BP GO:0071267 L-methionine salvage IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0071806 protein transmembrane transport IEP Neighborhood
MF GO:0072328 alkene binding IEP Neighborhood
BP GO:0072329 monocarboxylic acid catabolic process IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
BP GO:0072662 protein localization to peroxisome IEP Neighborhood
BP GO:0072663 establishment of protein localization to peroxisome IEP Neighborhood
BP GO:0072665 protein localization to vacuole IEP Neighborhood
BP GO:0072666 establishment of protein localization to vacuole IEP Neighborhood
BP GO:0090558 plant epidermis development IEP Neighborhood
MF GO:0097599 xylanase activity IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
BP GO:1901658 glycosyl compound catabolic process IEP Neighborhood
CC GO:1902495 transmembrane transporter complex IEP Neighborhood
BP GO:1902531 regulation of intracellular signal transduction IEP Neighborhood
BP GO:1902532 negative regulation of intracellular signal transduction IEP Neighborhood
CC GO:1990351 transporter complex IEP Neighborhood
InterPro domains Description Start Stop
IPR018121 7-in-absentia-prot_TRAF-dom 105 304
No external refs found!