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  5. Mp2g19920.1

Mp2g19920.1


Description : Ran GTPase


Gene families : OG0001686 (Archaeplastida) Phylogenetic Tree(s): OG0001686_tree ,
OG_05_0001807 (LandPlants) Phylogenetic Tree(s): OG_05_0001807_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp2g19920.1
Cluster HCCA: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00207870 evm_27.TU.AmTr_v1... Protein translocation.nucleus.nucleocytoplasmic... 0.04 Archaeplastida
AT5G20020 RAN2 RAS-related GTP-binding nuclear protein 2 0.06 Archaeplastida
AT5G55190 RAN3, ATRAN3 RAN GTPase 3 0.02 Archaeplastida
Cpa|evm.model.tig00000194.22 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.04 Archaeplastida
Cre03.g191050 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.05 Archaeplastida
GSVIVT01015482001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.03 Archaeplastida
GSVIVT01035804001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.03 Archaeplastida
GSVIVT01035805001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.02 Archaeplastida
Pp3c20_16160V3.1 No alias RAN GTPase 3 0.03 Archaeplastida
Pp3c23_8280V3.1 No alias RAN GTPase 3 0.04 Archaeplastida
Pp3c23_8300V3.1 No alias RAN GTPase 3 0.02 Archaeplastida
Smo270966 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.02 Archaeplastida
Solyc01g104680.4.1 No alias Ran GTPase 0.02 Archaeplastida
Solyc01g104700.4.1 No alias Ran GTPase 0.04 Archaeplastida
Zm00001e020317_P002 No alias Ran GTPase 0.02 Archaeplastida
Zm00001e032496_P003 No alias Ran GTPase 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003684 damaged DNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0006289 nucleotide-excision repair IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0010498 proteasomal protein catabolic process IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
BP GO:0030163 protein catabolic process IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043248 proteasome assembly IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001806 Small_GTPase 16 172
No external refs found!