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  5. Mp2g20000.1

Mp2g20000.1


Description : starch synthase (SSIII)


Gene families : OG0000161 (Archaeplastida) Phylogenetic Tree(s): OG0000161_tree ,
OG_05_0005539 (LandPlants) Phylogenetic Tree(s): OG_05_0005539_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp2g20000.1
Cluster HCCA: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
AT3G01180 SS2, AtSS2 starch synthase 2 0.02 Archaeplastida
AT4G18240 ATSS4, SS4, SSIV starch synthase 4 0.04 Archaeplastida
Cre06.g257050 No alias Granule-bound starch synthase 1,... 0.02 Archaeplastida
Cre12.g521700 No alias Enzyme classification.EC_2 transferases.EC_2.4... 0.02 Archaeplastida
GSVIVT01019680001 No alias Carbohydrate metabolism.starch... 0.03 Archaeplastida
Gb_31910 No alias starch synthase (SSIII) 0.03 Archaeplastida
LOC_Os04g53310.1 No alias starch synthase (SSIII) 0.03 Archaeplastida
MA_10437241g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_64002g0010 No alias Probable starch synthase 4, chloroplastic/amyloplastic... 0.03 Archaeplastida
Pp3c22_6120V3.1 No alias starch synthase 2 0.02 Archaeplastida
Solyc02g071040.3.1 No alias starch synthase (SSIV) 0.02 Archaeplastida
Solyc02g080570.3.1 No alias starch synthase (SSIII) 0.03 Archaeplastida
Zm00001e027473_P001 No alias starch synthase (SSIV) 0.03 Archaeplastida
Zm00001e041682_P002 No alias starch synthase (SSIII) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:2001070 starch binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0002790 peptide secretion IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004556 alpha-amylase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
CC GO:0005887 integral component of plasma membrane IEP Neighborhood
BP GO:0006163 purine nucleotide metabolic process IEP Neighborhood
BP GO:0006753 nucleoside phosphate metabolic process IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
BP GO:0009117 nucleotide metabolic process IEP Neighborhood
BP GO:0009119 ribonucleoside metabolic process IEP Neighborhood
BP GO:0009150 purine ribonucleotide metabolic process IEP Neighborhood
BP GO:0009259 ribonucleotide metabolic process IEP Neighborhood
BP GO:0009306 protein secretion IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Neighborhood
BP GO:0019637 organophosphate metabolic process IEP Neighborhood
BP GO:0019693 ribose phosphate metabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
CC GO:0031226 intrinsic component of plasma membrane IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0042278 purine nucleoside metabolic process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0046128 purine ribonucleoside metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Neighborhood
BP GO:0072521 purine-containing compound metabolic process IEP Neighborhood
BP GO:1901068 guanosine-containing compound metabolic process IEP Neighborhood
BP GO:1901135 carbohydrate derivative metabolic process IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR013534 Starch_synth_cat_dom 713 874
IPR005085 CBM25 276 358
IPR005085 CBM25 452 536
IPR005085 CBM25 614 701
No external refs found!