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  5. Mp3g00720.1

Mp3g00720.1


Description : cyclin (CYCT). regulatory component of CTDK-I polymerase-II kinase complex


Gene families : OG0000352 (Archaeplastida) Phylogenetic Tree(s): OG0000352_tree ,
OG_05_0001681 (LandPlants) Phylogenetic Tree(s): OG_05_0001681_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp3g00720.1
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00215360 evm_27.TU.AmTr_v1... RNA biosynthesis.RNA polymerase II-dependent... 0.02 Archaeplastida
AT5G45190 No alias Cyclin family protein 0.02 Archaeplastida
Cre10.g453050 No alias Cyclin-T1-4 OS=Oryza sativa subsp. japonica 0.01 Archaeplastida
Cre14.g613900 No alias Cell cycle.regulation.cyclins.CYCT-type cyclin 0.01 Archaeplastida
GSVIVT01013628001 No alias Cell cycle.regulation.cyclins.CYCT-type cyclin 0.02 Archaeplastida
GSVIVT01020280001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.06 Archaeplastida
GSVIVT01020870001 No alias Cell cycle.regulation.cyclins.CYCL-type cyclin 0.04 Archaeplastida
Gb_04195 No alias Cyclin-L1-1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_25727 No alias cyclin (CYCT) 0.03 Archaeplastida
Gb_38056 No alias cyclin (CYCT) 0.02 Archaeplastida
LOC_Os12g30020.2 No alias cyclin (CYCT). regulatory component of CTDK-I... 0.02 Archaeplastida
MA_101777g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_8507811g0010 No alias cyclin (CYCT) 0.03 Archaeplastida
MA_9140722g0010 No alias No annotation 0.02 Archaeplastida
Pp3c11_15990V3.1 No alias Cyclin family protein 0.05 Archaeplastida
Pp3c1_13010V3.1 No alias Cyclin family protein 0.04 Archaeplastida
Pp3c2_24721V3.1 No alias Cyclin family protein 0.05 Archaeplastida
Pp3c2_24723V3.1 No alias Cyclin family protein 0.03 Archaeplastida
Pp3c7_14590V3.1 No alias Cyclin family protein 0.03 Archaeplastida
Smo106266 No alias Cell cycle.regulation.cyclins.CYCT-type cyclin 0.02 Archaeplastida
Smo437421 No alias Cell cycle.regulation.cyclins.CYCT-type cyclin 0.02 Archaeplastida
Solyc01g098350.3.1 No alias cyclin (CYCL) 0.04 Archaeplastida
Solyc09g075760.4.1 No alias cyclin (CYCT) 0.02 Archaeplastida
Solyc10g078180.3.1 No alias cyclin (CYCT). regulatory component of CTDK-I... 0.05 Archaeplastida
Zm00001e000132_P005 No alias cyclin (CYCT). regulatory component of CTDK-I... 0.02 Archaeplastida
Zm00001e023107_P002 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e033489_P002 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e033879_P003 No alias cyclin (CYCT). regulatory component of CTDK-I... 0.05 Archaeplastida
Zm00001e041389_P001 No alias cyclin (CYCT). regulatory component of CTDK-I... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Neighborhood
CC GO:0000347 THO complex IEP Neighborhood
CC GO:0000445 THO complex part of transcription export complex IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004177 aminopeptidase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005777 peroxisome IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0019439 aromatic compound catabolic process IEP Neighborhood
MF GO:0030145 manganese ion binding IEP Neighborhood
BP GO:0034655 nucleobase-containing compound catabolic process IEP Neighborhood
CC GO:0042579 microbody IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
BP GO:0044270 cellular nitrogen compound catabolic process IEP Neighborhood
BP GO:0046700 heterocycle catabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:1901361 organic cyclic compound catabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR006671 Cyclin_N 37 177
No external refs found!