AT3G62610 (ATMYB11, PFG2, MYB11)

Aliases : ATMYB11, PFG2, MYB11

Description : myb domain protein 11

Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0043095 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G62610
Cluster	HCCA: Cluster_23

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00032p00057800	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
AMTR_s00032p00221670	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.05	Archaeplastida
AMTR_s00061p00110540	evm_27.TU.AmTr_v1...	Transcription factor MYB80 OS=Oryza sativa subsp. japonica	0.03	Archaeplastida
AT1G17950	BW52, ATMYB52, MYB52	myb domain protein 52	0.03	Archaeplastida
AT4G12350	AtMYB42, MYB42	myb domain protein 42	0.03	Archaeplastida
AT4G33450	ATMYB69, MYB69	myb domain protein 69	0.03	Archaeplastida
AT5G39700	MYB89, AtMYB89	myb domain protein 89	0.04	Archaeplastida
Cpa\|evm.model.tig00021108.38	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.01	Archaeplastida
GSVIVT01008005001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
GSVIVT01009032001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
GSVIVT01009280001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
GSVIVT01013126001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
GSVIVT01015102001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.02	Archaeplastida
GSVIVT01024353001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
GSVIVT01026868001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.04	Archaeplastida
GSVIVT01029145001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.02	Archaeplastida
GSVIVT01029941001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.05	Archaeplastida
GSVIVT01035177001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
Gb_34882	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os01g19330.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os01g49160.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
LOC_Os01g51260.1	No alias	transcription factor (MYB)	0.04	Archaeplastida
LOC_Os01g74590.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
LOC_Os02g40530.1	No alias	transcription factor (MYB)	0.04	Archaeplastida
LOC_Os02g46780.1	No alias	transcription factor (MYB)	0.04	Archaeplastida
LOC_Os03g26130.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os03g51110.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os05g04210.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os05g04820.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os05g48010.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os05g49310.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os07g43580.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os07g44090.3	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os10g33810.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
MA_10426901g0020	No alias	transcription factor (MYB)	0.02	Archaeplastida
MA_10431212g0010	No alias	transcription factor (MYB)	0.03	Archaeplastida
MA_10435612g0010	No alias	transcription factor (MYB)	0.03	Archaeplastida
MA_117992g0010	No alias	transcription factor (MYB)	0.02	Archaeplastida
MA_128871g0010	No alias	transcription factor (MYB)	0.04	Archaeplastida
MA_130918g0010	No alias	transcription factor (MYB)	0.03	Archaeplastida
MA_139238g0010	No alias	transcription factor (MYB)	0.03	Archaeplastida
MA_14452g0010	No alias	transcription factor (MYB)	0.03	Archaeplastida
MA_223201g0010	No alias	transcription factor (MYB)	0.03	Archaeplastida
MA_33964g0010	No alias	transcription factor (MYB)	0.02	Archaeplastida
MA_51173g0010	No alias	transcription factor (MYB)	0.02	Archaeplastida
MA_94130g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_9483804g0010	No alias	transcription factor (MYB)	0.03	Archaeplastida
Pp3c13_8880V3.1	No alias	myb domain protein 4r1	0.02	Archaeplastida
Pp3c16_9970V3.1	No alias	myb domain protein 106	0.02	Archaeplastida
Pp3c17_7730V3.1	No alias	myb domain protein 55	0.02	Archaeplastida
Pp3c18_340V3.1	No alias	myb domain protein 105	0.02	Archaeplastida
Pp3c1_1650V3.1	No alias	myb domain protein 105	0.02	Archaeplastida
Solyc01g005660.3.1	No alias	transcription factor (MYB)	0.05	Archaeplastida
Solyc02g079280.3.1	No alias	transcription factor (MYB)	0.04	Archaeplastida
Solyc02g089190.2.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc03g005570.3.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc03g093890.3.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc04g014470.3.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc04g079360.1.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc05g007710.3.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc06g083900.3.1	No alias	transcription factor (MYB)	0.04	Archaeplastida
Solyc07g006750.3.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc07g054840.4.1	No alias	transcription factor (MYB)	0.04	Archaeplastida
Solyc08g005870.2.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc08g065910.1.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
Solyc08g076710.3.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc08g079270.3.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc09g008250.4.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc09g090790.3.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc10g008700.3.1	No alias	No annotation	0.03	Archaeplastida
Solyc12g049300.2.1	No alias	transcription factor (MYB)	0.04	Archaeplastida
Zm00001e004164_P002	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e005507_P001	No alias	transcription factor (MYB)	0.02	Archaeplastida
Zm00001e005823_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e007085_P001	No alias	transcription factor (MYB)	0.04	Archaeplastida
Zm00001e009849_P001	No alias	transcription factor (MYB)	0.02	Archaeplastida
Zm00001e011944_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e017428_P003	No alias	transcription factor (MYB)	0.04	Archaeplastida
Zm00001e020004_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e027531_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e028201_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e028886_P003	No alias	transcription factor (MYB)	0.02	Archaeplastida
Zm00001e030775_P002	No alias	transcription factor (MYB)	0.02	Archaeplastida
Zm00001e033519_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e034214_P001	No alias	transcription factor (MYB)	0.02	Archaeplastida
Zm00001e040384_P001	No alias	transcription factor (MYB)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009812	flavonoid metabolic process	None	Extended
BP	GO:0009813	flavonoid biosynthetic process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0042440	pigment metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0046148	pigment biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051552	flavone metabolic process	None	Extended
BP	GO:0051553	flavone biosynthetic process	None	Extended
BP	GO:0051554	flavonol metabolic process	None	Extended
BP	GO:0051555	flavonol biosynthetic process	IMP	Interproscan
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended
BP	GO:1901617	organic hydroxy compound biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	IEP	Neighborhood
BP	GO:0001558	regulation of cell growth	IEP	Neighborhood
BP	GO:0001944	vasculature development	IEP	Neighborhood
MF	GO:0004126	cytidine deaminase activity	IEP	Neighborhood
MF	GO:0004723	calcium-dependent protein serine/threonine phosphatase activity	IEP	Neighborhood
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Neighborhood
BP	GO:0006213	pyrimidine nucleoside metabolic process	IEP	Neighborhood
BP	GO:0006216	cytidine catabolic process	IEP	Neighborhood
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	Neighborhood
BP	GO:0006904	vesicle docking involved in exocytosis	IEP	Neighborhood
MF	GO:0008168	methyltransferase activity	IEP	Neighborhood
MF	GO:0008171	O-methyltransferase activity	IEP	Neighborhood
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	Neighborhood
BP	GO:0009116	nucleoside metabolic process	IEP	Neighborhood
BP	GO:0009119	ribonucleoside metabolic process	IEP	Neighborhood
BP	GO:0009164	nucleoside catabolic process	IEP	Neighborhood
BP	GO:0009698	phenylpropanoid metabolic process	IEP	Neighborhood
BP	GO:0009845	seed germination	IEP	Neighborhood
BP	GO:0009888	tissue development	IEP	Neighborhood
BP	GO:0009957	epidermal cell fate specification	IEP	Neighborhood
BP	GO:0009972	cytidine deamination	IEP	Neighborhood
BP	GO:0009996	negative regulation of cell fate specification	IEP	Neighborhood
BP	GO:0010023	proanthocyanidin biosynthetic process	IEP	Neighborhood
BP	GO:0010026	trichome differentiation	IEP	Neighborhood
BP	GO:0010061	regulation of trichoblast fate specification	IEP	Neighborhood
BP	GO:0010062	negative regulation of trichoblast fate specification	IEP	Neighborhood
BP	GO:0010087	phloem or xylem histogenesis	IEP	Neighborhood
BP	GO:0010089	xylem development	IEP	Neighborhood
BP	GO:0010090	trichome morphogenesis	IEP	Neighborhood
BP	GO:0010191	mucilage metabolic process	IEP	Neighborhood
BP	GO:0010192	mucilage biosynthetic process	IEP	Neighborhood
BP	GO:0010214	seed coat development	IEP	Neighborhood
MF	GO:0010340	carboxyl-O-methyltransferase activity	IEP	Neighborhood
MF	GO:0010341	gibberellin carboxyl-O-methyltransferase activity	IEP	Neighborhood
BP	GO:0010453	regulation of cell fate commitment	IEP	Neighborhood
BP	GO:0010454	negative regulation of cell fate commitment	IEP	Neighborhood
MF	GO:0016207	4-coumarate-CoA ligase activity	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Neighborhood
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Neighborhood
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	Neighborhood
MF	GO:0016814	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines	IEP	Neighborhood
CC	GO:0019005	SCF ubiquitin ligase complex	IEP	Neighborhood
MF	GO:0019239	deaminase activity	IEP	Neighborhood
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Neighborhood
BP	GO:0019941	modification-dependent protein catabolic process	IEP	Neighborhood
BP	GO:0022406	membrane docking	IEP	Neighborhood
BP	GO:0022603	regulation of anatomical structure morphogenesis	IEP	Neighborhood
BP	GO:0022604	regulation of cell morphogenesis	IEP	Neighborhood
BP	GO:0030154	cell differentiation	IEP	Neighborhood
CC	GO:0031461	cullin-RING ubiquitin ligase complex	IEP	Neighborhood
BP	GO:0034656	nucleobase-containing small molecule catabolic process	IEP	Neighborhood
BP	GO:0035966	response to topologically incorrect protein	IEP	Neighborhood
BP	GO:0040008	regulation of growth	IEP	Neighborhood
BP	GO:0042023	DNA endoreduplication	IEP	Neighborhood
MF	GO:0042409	caffeoyl-CoA O-methyltransferase activity	IEP	Neighborhood
BP	GO:0042454	ribonucleoside catabolic process	IEP	Neighborhood
BP	GO:0042546	cell wall biogenesis	IEP	Neighborhood
BP	GO:0042659	regulation of cell fate specification	IEP	Neighborhood
BP	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	IEP	Neighborhood
BP	GO:0043248	proteasome assembly	IEP	Neighborhood
BP	GO:0043455	regulation of secondary metabolic process	IEP	Neighborhood
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	Neighborhood
BP	GO:0044786	cell cycle DNA replication	IEP	Neighborhood
BP	GO:0045596	negative regulation of cell differentiation	IEP	Neighborhood
BP	GO:0046087	cytidine metabolic process	IEP	Neighborhood
BP	GO:0046131	pyrimidine ribonucleoside metabolic process	IEP	Neighborhood
BP	GO:0046133	pyrimidine ribonucleoside catabolic process	IEP	Neighborhood
BP	GO:0046135	pyrimidine nucleoside catabolic process	IEP	Neighborhood
BP	GO:0048278	vesicle docking	IEP	Neighborhood
BP	GO:0048354	mucilage biosynthetic process involved in seed coat development	IEP	Neighborhood
BP	GO:0048359	mucilage metabolic process involved in seed coat development	IEP	Neighborhood
BP	GO:0048513	animal organ development	IEP	Neighborhood
BP	GO:0048638	regulation of developmental growth	IEP	Neighborhood
BP	GO:0051128	regulation of cellular component organization	IEP	Neighborhood
BP	GO:0051510	regulation of unidimensional cell growth	IEP	Neighborhood
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	IEP	Neighborhood
BP	GO:0051788	response to misfolded protein	IEP	Neighborhood
BP	GO:0072527	pyrimidine-containing compound metabolic process	IEP	Neighborhood
BP	GO:0072529	pyrimidine-containing compound catabolic process	IEP	Neighborhood
BP	GO:0140029	exocytic process	IEP	Neighborhood
BP	GO:0140056	organelle localization by membrane tethering	IEP	Neighborhood
BP	GO:1900376	regulation of secondary metabolite biosynthetic process	IEP	Neighborhood
BP	GO:1901136	carbohydrate derivative catabolic process	IEP	Neighborhood
BP	GO:1901565	organonitrogen compound catabolic process	IEP	Neighborhood
BP	GO:1901657	glycosyl compound metabolic process	IEP	Neighborhood
BP	GO:1901658	glycosyl compound catabolic process	IEP	Neighborhood
BP	GO:1903338	regulation of cell wall organization or biogenesis	IEP	Neighborhood
BP	GO:1903888	regulation of plant epidermal cell differentiation	IEP	Neighborhood
BP	GO:1903889	negative regulation of plant epidermal cell differentiation	IEP	Neighborhood
BP	GO:1905421	regulation of plant organ morphogenesis	IEP	Neighborhood
BP	GO:1905422	negative regulation of plant organ morphogenesis	IEP	Neighborhood
BP	GO:2000029	regulation of proanthocyanidin biosynthetic process	IEP	Neighborhood
BP	GO:2000067	regulation of root morphogenesis	IEP	Neighborhood
BP	GO:2000652	regulation of secondary cell wall biogenesis	IEP	Neighborhood
BP	GO:2000762	regulation of phenylpropanoid metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001005	SANT/Myb	67	112
IPR001005	SANT/Myb	14	61

External Links

No external refs found!

AT3G62610 (ATMYB11, PFG2, MYB11)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation