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  5. Mp3g01000.1

Mp3g01000.1


Description : pectate lyase


Gene families : OG0000134 (Archaeplastida) Phylogenetic Tree(s): OG0000134_tree ,
OG_05_0000111 (LandPlants) Phylogenetic Tree(s): OG_05_0000111_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp3g01000.1
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00189000 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and degradation.pectate lyase 0.03 Archaeplastida
GSVIVT01000592001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.05 Archaeplastida
Gb_02248 No alias pectate lyase 0.03 Archaeplastida
Gb_19802 No alias pectate lyase 0.02 Archaeplastida
LOC_Os10g31910.1 No alias pectate lyase 0.02 Archaeplastida
MA_101171g0010 No alias pectate lyase 0.02 Archaeplastida
MA_10205415g0010 No alias pectate lyase 0.04 Archaeplastida
MA_10426822g0020 No alias pectate lyase 0.02 Archaeplastida
MA_10437227g0010 No alias pectate lyase 0.04 Archaeplastida
MA_170547g0010 No alias pectate lyase 0.03 Archaeplastida
MA_203992g0010 No alias pectate lyase 0.02 Archaeplastida
MA_66914g0010 No alias pectate lyase 0.05 Archaeplastida
MA_91467g0010 No alias pectate lyase 0.05 Archaeplastida
MA_91467g0020 No alias pectate lyase 0.02 Archaeplastida
MA_956526g0010 No alias pectate lyase 0.02 Archaeplastida
MA_97947g0010 No alias pectate lyase 0.02 Archaeplastida
Mp8g00770.1 No alias pectate lyase 0.03 Archaeplastida
Mp8g10190.1 No alias pectate lyase 0.04 Archaeplastida
Pp3c10_20140V3.1 No alias Pectin lyase-like superfamily protein 0.01 Archaeplastida
Pp3c13_1640V3.1 No alias Pectin lyase-like superfamily protein 0.07 Archaeplastida
Pp3c17_16370V3.1 No alias Pectin lyase-like superfamily protein 0.06 Archaeplastida
Pp3c1_33130V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c3_35190V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Smo407495 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.05 Archaeplastida
Solyc01g010740.4.1 No alias pectate lyase 0.04 Archaeplastida
Solyc06g071840.3.1 No alias Probable pectate lyase 22 OS=Arabidopsis thaliana... 0.07 Archaeplastida
Solyc06g083580.4.1 No alias pectate lyase 0.03 Archaeplastida
Solyc09g008380.3.1 No alias pectate lyase 0.03 Archaeplastida
Solyc09g061890.3.1 No alias pectate lyase 0.03 Archaeplastida
Solyc11g008140.3.1 No alias pectate lyase 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002022 Pec_lyase 144 329
No external refs found!