AT3G62770 (AtATG18a)


Aliases : AtATG18a

Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG0001600 (Archaeplastida) Phylogenetic Tree(s): OG0001600_tree ,
OG_05_0001405 (LandPlants) Phylogenetic Tree(s): OG_05_0001405_tree ,
OG_06_0001795 (SeedPlants) Phylogenetic Tree(s): OG_06_0001795_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G62770
Cluster HCCA: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g70780.1 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.05 Archaeplastida
Pp3c17_4970V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005829 cytosol IDA Interproscan
BP GO:0006635 fatty acid beta-oxidation RCA Interproscan
BP GO:0006914 autophagy IMP Interproscan
BP GO:0006914 autophagy RCA Interproscan
BP GO:0006970 response to osmotic stress IEP Interproscan
BP GO:0006979 response to oxidative stress IEP Interproscan
BP GO:0009414 response to water deprivation IMP Interproscan
BP GO:0009414 response to water deprivation IEP Interproscan
BP GO:0009651 response to salt stress IEP Interproscan
BP GO:0010150 leaf senescence IMP Interproscan
BP GO:0016558 protein import into peroxisome matrix RCA Interproscan
CC GO:0031090 organelle membrane IBA Interproscan
BP GO:0042594 response to starvation IMP Interproscan
BP GO:0042594 response to starvation IEP Interproscan
BP GO:0044265 cellular macromolecule catabolic process RCA Interproscan
BP GO:0048102 autophagic cell death IMP Interproscan
BP GO:0050832 defense response to fungus IEP Interproscan
MF GO:0080025 phosphatidylinositol-3,5-bisphosphate binding IBA Interproscan
Type GO Term Name Evidence Source
BP GO:0000302 response to reactive oxygen species IEP Neighborhood
CC GO:0000813 ESCRT I complex IEP Neighborhood
MF GO:0003729 mRNA binding IEP Neighborhood
MF GO:0004723 calcium-dependent protein serine/threonine phosphatase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005432 calcium:sodium antiporter activity IEP Neighborhood
CC GO:0005681 spliceosomal complex IEP Neighborhood
CC GO:0005768 endosome IEP Neighborhood
CC GO:0005769 early endosome IEP Neighborhood
CC GO:0005770 late endosome IEP Neighborhood
CC GO:0005795 Golgi stack IEP Neighborhood
CC GO:0005886 plasma membrane IEP Neighborhood
BP GO:0006301 postreplication repair IEP Neighborhood
BP GO:0006376 mRNA splice site selection IEP Neighborhood
BP GO:0006497 protein lipidation IEP Neighborhood
BP GO:0006498 N-terminal protein lipidation IEP Neighborhood
BP GO:0006499 N-terminal protein myristoylation IEP Neighborhood
BP GO:0009266 response to temperature stimulus IEP Neighborhood
BP GO:0009404 toxin metabolic process IEP Neighborhood
BP GO:0009407 toxin catabolic process IEP Neighborhood
BP GO:0009408 response to heat IEP Neighborhood
BP GO:0009608 response to symbiont IEP Neighborhood
BP GO:0009610 response to symbiotic fungus IEP Neighborhood
BP GO:0009636 response to toxic substance IEP Neighborhood
BP GO:0009642 response to light intensity IEP Neighborhood
BP GO:0009644 response to high light intensity IEP Neighborhood
BP GO:0010091 trichome branching IEP Neighborhood
BP GO:0010188 response to microbial phytotoxin IEP Neighborhood
BP GO:0010260 animal organ senescence IEP Neighborhood
BP GO:0010286 heat acclimation IEP Neighborhood
MF GO:0015085 calcium ion transmembrane transporter activity IEP Neighborhood
MF GO:0015368 calcium:cation antiporter activity IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015914 phospholipid transport IEP Neighborhood
BP GO:0016137 glycoside metabolic process IEP Neighborhood
BP GO:0016139 glycoside catabolic process IEP Neighborhood
CC GO:0016607 nuclear speck IEP Neighborhood
MF GO:0016832 aldehyde-lyase activity IEP Neighborhood
BP GO:0018377 protein myristoylation IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0022618 ribonucleoprotein complex assembly IEP Neighborhood
BP GO:0031365 N-terminal protein amino acid modification IEP Neighborhood
CC GO:0031410 cytoplasmic vesicle IEP Neighborhood
CC GO:0031982 vesicle IEP Neighborhood
MF GO:0032182 ubiquitin-like protein binding IEP Neighborhood
CC GO:0035061 interchromatin granule IEP Neighborhood
BP GO:0035725 sodium ion transmembrane transport IEP Neighborhood
CC GO:0036452 ESCRT complex IEP Neighborhood
BP GO:0042537 benzene-containing compound metabolic process IEP Neighborhood
BP GO:0042542 response to hydrogen peroxide IEP Neighborhood
MF GO:0043130 ubiquitin binding IEP Neighborhood
BP GO:0043484 regulation of RNA splicing IEP Neighborhood
BP GO:0043543 protein acylation IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044440 endosomal part IEP Neighborhood
BP GO:0045037 protein import into chloroplast stroma IEP Neighborhood
BP GO:0046482 para-aminobenzoic acid metabolic process IEP Neighborhood
MF GO:0046593 mandelonitrile lyase activity IEP Neighborhood
BP GO:0048024 regulation of mRNA splicing, via spliceosome IEP Neighborhood
BP GO:0050684 regulation of mRNA processing IEP Neighborhood
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Neighborhood
BP GO:0080148 negative regulation of response to water deprivation IEP Neighborhood
CC GO:0097708 intracellular vesicle IEP Neighborhood
BP GO:0098754 detoxification IEP Neighborhood
CC GO:0098791 Golgi subcompartment IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1901332 negative regulation of lateral root development IEP Neighborhood
BP GO:1901658 glycosyl compound catabolic process IEP Neighborhood
BP GO:1903311 regulation of mRNA metabolic process IEP Neighborhood
BP GO:2000023 regulation of lateral root development IEP Neighborhood
BP GO:2000069 regulation of post-embryonic root development IEP Neighborhood
BP GO:2000070 regulation of response to water deprivation IEP Neighborhood
BP GO:2000280 regulation of root development IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 295 320
No external refs found!