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  5. Mp3g07170.1

Mp3g07170.1


Description : component RPL35 of LSU proteome component


Gene families : OG0002158 (Archaeplastida) Phylogenetic Tree(s): OG0002158_tree ,
OG_05_0002518 (LandPlants) Phylogenetic Tree(s): OG_05_0002518_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp3g07170.1
Cluster HCCA: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
AT2G39390 No alias Ribosomal L29 family protein 0.05 Archaeplastida
AT3G09500 No alias Ribosomal L29 family protein 0.06 Archaeplastida
AT3G55170 No alias Ribosomal L29 family protein 0.03 Archaeplastida
AT5G02610 No alias Ribosomal L29 family protein 0.06 Archaeplastida
Cre14.g617900 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 Archaeplastida
GSVIVT01005972001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 Archaeplastida
GSVIVT01025050001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 Archaeplastida
LOC_Os02g30050.1 No alias component RPL35 of LSU proteome component 0.02 Archaeplastida
MA_10429159g0020 No alias component RPL35 of LSU proteome component 0.03 Archaeplastida
MA_92240g0010 No alias component RPL35 of LSU proteome component 0.03 Archaeplastida
Pp3c13_5200V3.1 No alias Ribosomal L29 family protein 0.04 Archaeplastida
Pp3c26_13720V3.1 No alias Ribosomal L29 family protein 0.02 Archaeplastida
Pp3c3_2800V3.1 No alias Ribosomal L29 family protein 0.08 Archaeplastida
Pp3c4_30730V3.1 No alias Ribosomal L29 family protein 0.05 Archaeplastida
Smo419858 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 Archaeplastida
Smo438324 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 Archaeplastida
Smo79331 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 Archaeplastida
Solyc04g010240.3.1 No alias component RPL35 of LSU proteome component 0.04 Archaeplastida
Zm00001e008428_P002 No alias component RPL35 of LSU proteome component 0.04 Archaeplastida
Zm00001e014607_P001 No alias component RPL35 of LSU proteome component 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000313 organellar ribosome IEP Neighborhood
BP GO:0000724 double-strand break repair via homologous recombination IEP Neighborhood
BP GO:0000725 recombinational repair IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
CC GO:0005761 mitochondrial ribosome IEP Neighborhood
BP GO:0006302 double-strand break repair IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001854 Ribosomal_L29/L35 8 63
No external refs found!