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  5. Mp3g07610.1

Mp3g07610.1


Description : histone demethylase (PKDM9). transcription factor (JUMONJI)


Gene families : OG0002916 (Archaeplastida) Phylogenetic Tree(s): OG0002916_tree ,
OG_05_0001878 (LandPlants) Phylogenetic Tree(s): OG_05_0001878_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp3g07610.1
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00181100 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.JUMONJI... 0.04 Archaeplastida
AT3G48430 REF6 relative of early flowering 6 0.03 Archaeplastida
AT5G04240 ELF6 Zinc finger (C2H2 type) family protein / transcription... 0.04 Archaeplastida
GSVIVT01007564001 No alias RNA biosynthesis.transcriptional activation.JUMONJI... 0.02 Archaeplastida
Gb_39738 No alias histone demethylase (PKDM9). transcription factor (JUMONJI) 0.02 Archaeplastida
LOC_Os03g05680.1 No alias transcription factor (JUMONJI) 0.02 Archaeplastida
LOC_Os12g18150.1 No alias histone demethylase (PKDM9). transcription factor (JUMONJI) 0.03 Archaeplastida
MA_138058g0010 No alias transcription factor (JUMONJI) 0.03 Archaeplastida
Pp3c11_24630V3.1 No alias relative of early flowering 6 0.06 Archaeplastida
Pp3c7_8710V3.1 No alias Zinc finger (C2H2 type) family protein / transcription... 0.07 Archaeplastida
Smo440762 No alias RNA biosynthesis.transcriptional activation.JUMONJI... 0.02 Archaeplastida
Solyc03g111590.4.1 No alias histone demethylase (PKDM9). transcription factor (JUMONJI) 0.02 Archaeplastida
Zm00001e028534_P001 No alias histone demethylase (PKDM9). transcription factor (JUMONJI) 0.02 Archaeplastida
Zm00001e039647_P002 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000726 non-recombinational repair IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0004677 DNA-dependent protein kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006302 double-strand break repair IEP Neighborhood
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
InterPro domains Description Start Stop
IPR003349 JmjN 17 50
IPR003347 JmjC_dom 316 453
No external refs found!