AT3G63300 (FKD1)


Aliases : FKD1

Description : FORKED 1


Gene families : OG0001229 (Archaeplastida) Phylogenetic Tree(s): OG0001229_tree ,
OG_05_0000856 (LandPlants) Phylogenetic Tree(s): OG_05_0000856_tree ,
OG_06_0001397 (SeedPlants) Phylogenetic Tree(s): OG_06_0001397_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G63300
Cluster HCCA: Cluster_264

Target Alias Description ECC score Gene Family Method Actions
MA_340269g0010 No alias VAN3-binding protein OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_90368g0010 No alias VAN3-binding protein OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc08g078500.3.1 No alias VAN3-binding protein OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc09g065590.3.1 No alias VAN3-binding protein OS=Arabidopsis thaliana... 0.07 Archaeplastida
Zm00001e005060_P001 No alias VAN3-binding protein OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e012419_P002 No alias VAN3-binding protein OS=Arabidopsis thaliana... 0.07 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
BP GO:0007165 signal transduction ISS Interproscan
CC GO:0009507 chloroplast ISM Interproscan
BP GO:0009733 response to auxin IEP Interproscan
BP GO:0009734 auxin-activated signaling pathway IMP Interproscan
BP GO:0010087 phloem or xylem histogenesis IMP Interproscan
BP GO:0010305 leaf vascular tissue pattern formation IMP Interproscan
MF GO:0035091 phosphatidylinositol binding ISS Interproscan
BP GO:0042127 regulation of cell proliferation RCA Interproscan
Type GO Term Name Evidence Source
BP GO:0000082 G1/S transition of mitotic cell cycle IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
BP GO:0000226 microtubule cytoskeleton organization IEP Neighborhood
BP GO:0000280 nuclear division IEP Neighborhood
CC GO:0000785 chromatin IEP Neighborhood
CC GO:0000790 nuclear chromatin IEP Neighborhood
BP GO:0000911 cytokinesis by cell plate formation IEP Neighborhood
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0001872 (1->3)-beta-D-glucan binding IEP Neighborhood
BP GO:0003006 developmental process involved in reproduction IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006261 DNA-dependent DNA replication IEP Neighborhood
BP GO:0006304 DNA modification IEP Neighborhood
BP GO:0006305 DNA alkylation IEP Neighborhood
BP GO:0006306 DNA methylation IEP Neighborhood
BP GO:0006346 methylation-dependent chromatin silencing IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006949 syncytium formation IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0006997 nucleus organization IEP Neighborhood
BP GO:0007000 nucleolus organization IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007051 spindle organization IEP Neighborhood
BP GO:0007166 cell surface receptor signaling pathway IEP Neighborhood
BP GO:0007167 enzyme linked receptor protein signaling pathway IEP Neighborhood
BP GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway IEP Neighborhood
BP GO:0007267 cell-cell signaling IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008283 cell proliferation IEP Neighborhood
BP GO:0008356 asymmetric cell division IEP Neighborhood
MF GO:0008810 cellulase activity IEP Neighborhood
BP GO:0009615 response to virus IEP Neighborhood
BP GO:0009616 virus induced gene silencing IEP Neighborhood
BP GO:0009653 anatomical structure morphogenesis IEP Neighborhood
BP GO:0009664 plant-type cell wall organization IEP Neighborhood
BP GO:0009799 specification of symmetry IEP Neighborhood
BP GO:0009831 plant-type cell wall modification involved in multidimensional cell growth IEP Neighborhood
BP GO:0009855 determination of bilateral symmetry IEP Neighborhood
BP GO:0009887 animal organ morphogenesis IEP Neighborhood
BP GO:0009944 polarity specification of adaxial/abaxial axis IEP Neighborhood
BP GO:0009965 leaf morphogenesis IEP Neighborhood
BP GO:0010014 meristem initiation IEP Neighborhood
BP GO:0010016 shoot system morphogenesis IEP Neighborhood
BP GO:0010075 regulation of meristem growth IEP Neighborhood
BP GO:0010089 xylem development IEP Neighborhood
BP GO:0010091 trichome branching IEP Neighborhood
BP GO:0010103 stomatal complex morphogenesis IEP Neighborhood
BP GO:0010148 transpiration IEP Neighborhood
BP GO:0010267 production of ta-siRNAs involved in RNA interference IEP Neighborhood
BP GO:0010359 regulation of anion channel activity IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0019199 transmembrane receptor protein kinase activity IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0023052 signaling IEP Neighborhood
BP GO:0030155 regulation of cell adhesion IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
BP GO:0030422 production of siRNA involved in RNA interference IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
BP GO:0031048 chromatin silencing by small RNA IEP Neighborhood
BP GO:0031050 dsRNA fragmentation IEP Neighborhood
BP GO:0031540 regulation of anthocyanin biosynthetic process IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0032411 positive regulation of transporter activity IEP Neighborhood
BP GO:0032414 positive regulation of ion transmembrane transporter activity IEP Neighborhood
BP GO:0032506 cytokinetic process IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0034764 positive regulation of transmembrane transport IEP Neighborhood
BP GO:0034767 positive regulation of ion transmembrane transport IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
BP GO:0035196 production of miRNAs involved in gene silencing by miRNA IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0035821 modification of morphology or physiology of other organism IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0040008 regulation of growth IEP Neighborhood
BP GO:0042023 DNA endoreduplication IEP Neighborhood
BP GO:0042547 cell wall modification involved in multidimensional cell growth IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043270 positive regulation of ion transport IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
BP GO:0044003 modification by symbiont of host morphology or physiology IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044419 interspecies interaction between organisms IEP Neighborhood
BP GO:0044728 DNA methylation or demethylation IEP Neighborhood
BP GO:0044770 cell cycle phase transition IEP Neighborhood
BP GO:0044772 mitotic cell cycle phase transition IEP Neighborhood
BP GO:0044786 cell cycle DNA replication IEP Neighborhood
BP GO:0044843 cell cycle G1/S phase transition IEP Neighborhood
BP GO:0048281 inflorescence morphogenesis IEP Neighborhood
BP GO:0048285 organelle fission IEP Neighborhood
BP GO:0048439 flower morphogenesis IEP Neighborhood
BP GO:0048449 floral organ formation IEP Neighborhood
BP GO:0048451 petal formation IEP Neighborhood
BP GO:0048453 sepal formation IEP Neighborhood
BP GO:0048509 regulation of meristem development IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048638 regulation of developmental growth IEP Neighborhood
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP Neighborhood
BP GO:0050793 regulation of developmental process IEP Neighborhood
BP GO:0051050 positive regulation of transport IEP Neighborhood
BP GO:0051225 spindle assembly IEP Neighborhood
BP GO:0051301 cell division IEP Neighborhood
BP GO:0051567 histone H3-K9 methylation IEP Neighborhood
BP GO:0051607 defense response to virus IEP Neighborhood
BP GO:0051701 interaction with host IEP Neighborhood
BP GO:0051817 modification of morphology or physiology of other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0052018 modulation by symbiont of RNA levels in host IEP Neighborhood
BP GO:0052249 modulation of RNA levels in other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0061647 histone H3-K9 modification IEP Neighborhood
BP GO:0065001 specification of axis polarity IEP Neighborhood
BP GO:0070918 production of small RNA involved in gene silencing by RNA IEP Neighborhood
BP GO:0070925 organelle assembly IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071588 hydrogen peroxide mediated signaling pathway IEP Neighborhood
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:0090626 plant epidermis morphogenesis IEP Neighborhood
BP GO:0090698 post-embryonic plant morphogenesis IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
BP GO:0098586 cellular response to virus IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901527 abscisic acid-activated signaling pathway involved in stomatal movement IEP Neighborhood
BP GO:1901528 hydrogen peroxide mediated signaling pathway involved in stomatal movement IEP Neighborhood
BP GO:1901529 positive regulation of anion channel activity IEP Neighborhood
BP GO:1902410 mitotic cytokinetic process IEP Neighborhood
BP GO:1903047 mitotic cell cycle process IEP Neighborhood
BP GO:1903793 positive regulation of anion transport IEP Neighborhood
BP GO:1903961 positive regulation of anion transmembrane transport IEP Neighborhood
BP GO:1905392 plant organ morphogenesis IEP Neighborhood
BP GO:1905393 plant organ formation IEP Neighborhood
BP GO:2000027 regulation of animal organ morphogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR008546 DUF828 30 336
IPR013666 PH_pln 379 482
No external refs found!