Description : U-box domain-containing protein 62 OS=Arabidopsis thaliana (sp|q6dbn5|pub62_arath : 149.0)
Gene families : OG0000936 (Archaeplastida) Phylogenetic Tree(s): OG0000936_tree ,
OG_05_0005352 (LandPlants) Phylogenetic Tree(s): OG_05_0005352_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Mp3g08800.1 | |
Cluster | HCCA: Cluster_121 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
GSVIVT01032672001 | No alias | U-box domain-containing protein 62 OS=Arabidopsis thaliana | 0.02 | Archaeplastida | |
Gb_06756 | No alias | U-box domain-containing protein 62 OS=Arabidopsis... | 0.02 | Archaeplastida | |
MA_10429276g0020 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
MA_10433285g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
Pp3c12_23350V3.1 | No alias | RING/U-box superfamily protein | 0.02 | Archaeplastida | |
Pp3c1_30960V3.1 | No alias | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... | 0.01 | Archaeplastida | |
Pp3c2_29300V3.1 | No alias | RING/U-box superfamily protein | 0.03 | Archaeplastida | |
Solyc04g009340.3.1 | No alias | U-box domain-containing protein 63 OS=Arabidopsis... | 0.05 | Archaeplastida | |
Solyc07g066450.4.1 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000030 | mannosyltransferase activity | IEP | Neighborhood |
CC | GO:0000228 | nuclear chromosome | IEP | Neighborhood |
MF | GO:0000702 | oxidized base lesion DNA N-glycosylase activity | IEP | Neighborhood |
MF | GO:0003674 | molecular_function | IEP | Neighborhood |
MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
MF | GO:0003677 | DNA binding | IEP | Neighborhood |
MF | GO:0003684 | damaged DNA binding | IEP | Neighborhood |
MF | GO:0003723 | RNA binding | IEP | Neighborhood |
MF | GO:0004045 | aminoacyl-tRNA hydrolase activity | IEP | Neighborhood |
MF | GO:0004181 | metallocarboxypeptidase activity | IEP | Neighborhood |
MF | GO:0004376 | glycolipid mannosyltransferase activity | IEP | Neighborhood |
MF | GO:0004386 | helicase activity | IEP | Neighborhood |
MF | GO:0004559 | alpha-mannosidase activity | IEP | Neighborhood |
MF | GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity | IEP | Neighborhood |
MF | GO:0005488 | binding | IEP | Neighborhood |
MF | GO:0005515 | protein binding | IEP | Neighborhood |
CC | GO:0005643 | nuclear pore | IEP | Neighborhood |
CC | GO:0005694 | chromosome | IEP | Neighborhood |
BP | GO:0006284 | base-excision repair | IEP | Neighborhood |
BP | GO:0006289 | nucleotide-excision repair | IEP | Neighborhood |
BP | GO:0006325 | chromatin organization | IEP | Neighborhood |
BP | GO:0006334 | nucleosome assembly | IEP | Neighborhood |
BP | GO:0006338 | chromatin remodeling | IEP | Neighborhood |
BP | GO:0006396 | RNA processing | IEP | Neighborhood |
BP | GO:0006487 | protein N-linked glycosylation | IEP | Neighborhood |
BP | GO:0006488 | dolichol-linked oligosaccharide biosynthetic process | IEP | Neighborhood |
BP | GO:0006490 | oligosaccharide-lipid intermediate biosynthetic process | IEP | Neighborhood |
MF | GO:0008235 | metalloexopeptidase activity | IEP | Neighborhood |
MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
MF | GO:0008375 | acetylglucosaminyltransferase activity | IEP | Neighborhood |
MF | GO:0008534 | oxidized purine nucleobase lesion DNA N-glycosylase activity | IEP | Neighborhood |
BP | GO:0009987 | cellular process | IEP | Neighborhood |
MF | GO:0015923 | mannosidase activity | IEP | Neighborhood |
MF | GO:0015924 | mannosyl-oligosaccharide mannosidase activity | IEP | Neighborhood |
BP | GO:0016043 | cellular component organization | IEP | Neighborhood |
MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | Neighborhood |
MF | GO:0017056 | structural constituent of nuclear pore | IEP | Neighborhood |
MF | GO:0019104 | DNA N-glycosylase activity | IEP | Neighborhood |
BP | GO:0022607 | cellular component assembly | IEP | Neighborhood |
CC | GO:0030014 | CCR4-NOT complex | IEP | Neighborhood |
MF | GO:0030144 | alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity | IEP | Neighborhood |
BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Neighborhood |
BP | GO:0034728 | nucleosome organization | IEP | Neighborhood |
BP | GO:0043044 | ATP-dependent chromatin remodeling | IEP | Neighborhood |
BP | GO:0043486 | histone exchange | IEP | Neighborhood |
BP | GO:0043933 | protein-containing complex subunit organization | IEP | Neighborhood |
BP | GO:0044255 | cellular lipid metabolic process | IEP | Neighborhood |
MF | GO:0051751 | alpha-1,4-mannosyltransferase activity | IEP | Neighborhood |
BP | GO:0065003 | protein-containing complex assembly | IEP | Neighborhood |
BP | GO:0065004 | protein-DNA complex assembly | IEP | Neighborhood |
BP | GO:0070070 | proton-transporting V-type ATPase complex assembly | IEP | Neighborhood |
BP | GO:0070071 | proton-transporting two-sector ATPase complex assembly | IEP | Neighborhood |
BP | GO:0070072 | vacuolar proton-transporting V-type ATPase complex assembly | IEP | Neighborhood |
MF | GO:0070403 | NAD+ binding | IEP | Neighborhood |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | Neighborhood |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | Neighborhood |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Neighborhood |
MF | GO:0140103 | catalytic activity, acting on a glycoprotein | IEP | Neighborhood |
BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | Neighborhood |
MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
No InterPro domains available for this sequence
No external refs found! |