Mp3g10720.1

Description : Polygalacturonase OS=Chamaecyparis obtusa (sp|q7m1e7|pglr2_chaob : 311.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 227.7)

Gene families : OG0000096 (Archaeplastida) Phylogenetic Tree(s): OG0000096_tree ,
OG_05_0000273 (LandPlants) Phylogenetic Tree(s): OG_05_0000273_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Mp3g10720.1
Cluster	HCCA: Cluster_154

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00074p00182020	evm_27.TU.AmTr_v1...	No description available	0.02	Archaeplastida
AMTR_s00096p00099360	evm_27.TU.AmTr_v1...	Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase	0.02	Archaeplastida
AT1G02460	No alias	Pectin lyase-like superfamily protein	0.03	Archaeplastida
AT1G05650	No alias	Pectin lyase-like superfamily protein	0.03	Archaeplastida
AT1G05660	No alias	Pectin lyase-like superfamily protein	0.02	Archaeplastida
AT2G43880	No alias	Pectin lyase-like superfamily protein	0.02	Archaeplastida
AT2G43890	No alias	Pectin lyase-like superfamily protein	0.02	Archaeplastida
AT4G01890	No alias	Pectin lyase-like superfamily protein	0.02	Archaeplastida
GSVIVT01013800001	No alias	Cell wall.pectin.modification and...	0.02	Archaeplastida
GSVIVT01017644001	No alias	Polygalacturonase At1g48100 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01028132001	No alias	Polygalacturonase At1g48100 OS=Arabidopsis thaliana	0.02	Archaeplastida
GSVIVT01032114001	No alias	Polygalacturonase OS=Actinidia deliciosa	0.02	Archaeplastida
GSVIVT01032447001	No alias	Polygalacturonase At1g48100 OS=Arabidopsis thaliana	0.04	Archaeplastida
GSVIVT01033359001	No alias	Cell wall.pectin.modification and...	0.04	Archaeplastida
GSVIVT01033362001	No alias	Cell wall.pectin.modification and...	0.02	Archaeplastida
GSVIVT01033364001	No alias	Cell wall.pectin.modification and...	0.02	Archaeplastida
GSVIVT01038241001	No alias	Polygalacturonase OS=Prunus persica	0.03	Archaeplastida
Gb_07779	No alias	Polygalacturonase OS=Actinidia deliciosa...	0.04	Archaeplastida
LOC_Os01g19170.1	No alias	Polygalacturonase At1g48100 OS=Arabidopsis thaliana...	0.02	Archaeplastida
MA_63122g0010	No alias	Polygalacturonase OS=Actinidia deliciosa...	0.03	Archaeplastida
MA_9231294g0010	No alias	No annotation	0.02	Archaeplastida
Mp3g21140.1	No alias	Polygalacturonase At1g48100 OS=Arabidopsis thaliana...	0.05	Archaeplastida
Smo111266	No alias	Polygalacturonase OS=Chamaecyparis obtusa	0.03	Archaeplastida
Smo113633	No alias	Polygalacturonase ADPG1 OS=Arabidopsis thaliana	0.02	Archaeplastida
Smo78038	No alias	Cell wall.pectin.modification and...	0.02	Archaeplastida
Solyc01g079130.2.1	No alias	Polygalacturonase At1g48100 OS=Arabidopsis thaliana...	0.02	Archaeplastida
Solyc01g087280.2.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
Solyc12g009420.3.1	No alias	Polygalacturonase QRT2 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Solyc12g019220.1.1	No alias	Polygalacturonase OS=Prunus persica...	0.03	Archaeplastida
Solyc12g019230.2.1	No alias	Polygalacturonase OS=Prunus persica...	0.04	Archaeplastida
Zm00001e006092_P001	No alias	polygalacturonase (QRT2)	0.02	Archaeplastida
Zm00001e011814_P002	No alias	Polygalacturonase OS=Actinidia deliciosa...	0.02	Archaeplastida
Zm00001e036989_P001	No alias	Polygalacturonase At1g48100 OS=Arabidopsis thaliana...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004650	polygalacturonase activity	IEA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	IEP	Neighborhood
MF	GO:0004601	peroxidase activity	IEP	Neighborhood
MF	GO:0005215	transporter activity	IEP	Neighborhood
MF	GO:0005315	inorganic phosphate transmembrane transporter activity	IEP	Neighborhood
BP	GO:0006810	transport	IEP	Neighborhood
BP	GO:0006811	ion transport	IEP	Neighborhood
BP	GO:0006817	phosphate ion transport	IEP	Neighborhood
BP	GO:0006820	anion transport	IEP	Neighborhood
BP	GO:0006950	response to stress	IEP	Neighborhood
BP	GO:0006979	response to oxidative stress	IEP	Neighborhood
MF	GO:0008324	cation transmembrane transporter activity	IEP	Neighborhood
MF	GO:0008519	ammonium transmembrane transporter activity	IEP	Neighborhood
BP	GO:0010035	response to inorganic substance	IEP	Neighborhood
BP	GO:0010167	response to nitrate	IEP	Neighborhood
MF	GO:0015075	ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	Neighborhood
BP	GO:0015696	ammonium transport	IEP	Neighborhood
BP	GO:0015698	inorganic anion transport	IEP	Neighborhood
BP	GO:0015706	nitrate transport	IEP	Neighborhood
BP	GO:0015985	energy coupled proton transport, down electrochemical gradient	IEP	Neighborhood
BP	GO:0015986	ATP synthesis coupled proton transport	IEP	Neighborhood
MF	GO:0016209	antioxidant activity	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	Neighborhood
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Neighborhood
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
MF	GO:0022857	transmembrane transporter activity	IEP	Neighborhood
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEP	Neighborhood
CC	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)	IEP	Neighborhood
MF	GO:0045735	nutrient reservoir activity	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
MF	GO:0046912	transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
MF	GO:0048038	quinone binding	IEP	Neighborhood
BP	GO:0050896	response to stimulus	IEP	Neighborhood
BP	GO:0051179	localization	IEP	Neighborhood
BP	GO:0051234	establishment of localization	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
BP	GO:0071705	nitrogen compound transport	IEP	Neighborhood
BP	GO:1901698	response to nitrogen compound	IEP	Neighborhood
BP	GO:1901700	response to oxygen-containing compound	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000743	Glyco_hydro_28	156	474

External Links

No external refs found!

Mp3g10720.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation