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  5. AT4G00040

AT4G00040


Description : Chalcone and stilbene synthase family protein


Gene families : OG0005376 (Archaeplastida) Phylogenetic Tree(s): OG0005376_tree ,
OG_05_0003653 (LandPlants) Phylogenetic Tree(s): OG_05_0003653_tree ,
OG_06_0003565 (SeedPlants) Phylogenetic Tree(s): OG_06_0003565_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G00040
Cluster HCCA: Cluster_450

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00111p00033190 evm_27.TU.AmTr_v1... Cell wall.sporopollenin.synthesis.hydroxyalkyl... 0.03 Archaeplastida
AMTR_s00182p00053650 evm_27.TU.AmTr_v1... Cell wall.sporopollenin.synthesis.hydroxyalkyl... 0.03 Archaeplastida
GSVIVT01018219001 No alias Cell wall.sporopollenin.synthesis.hydroxyalkyl... 0.04 Archaeplastida
GSVIVT01024107001 No alias Type III polyketide synthase B OS=Arabidopsis thaliana 0.04 Archaeplastida
LOC_Os07g22850.1 No alias hydroxyalkyl alpha-pyrone synthase 0.06 Archaeplastida
LOC_Os10g34360.1 No alias hydroxyalkyl alpha-pyrone synthase 0.03 Archaeplastida
MA_4931944g0010 No alias Type III polyketide synthase A OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_619670g0010 No alias Type III polyketide synthase B OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc01g090600.4.1 No alias Type III polyketide synthase A OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e033354_P001 No alias hydroxyalkyl alpha-pyrone synthase 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0009699 phenylpropanoid biosynthetic process ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000003 reproduction IEP Neighborhood
BP GO:0000904 cell morphogenesis involved in differentiation IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005788 endoplasmic reticulum lumen IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
BP GO:0008216 spermidine metabolic process IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0009664 plant-type cell wall organization IEP Neighborhood
BP GO:0009826 unidimensional cell growth IEP Neighborhood
BP GO:0009827 plant-type cell wall modification IEP Neighborhood
BP GO:0009860 pollen tube growth IEP Neighborhood
BP GO:0009932 cell tip growth IEP Neighborhood
BP GO:0010208 pollen wall assembly IEP Neighborhood
BP GO:0010584 pollen exine formation IEP Neighborhood
BP GO:0010927 cellular component assembly involved in morphogenesis IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016298 lipase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
BP GO:0019915 lipid storage IEP Neighborhood
BP GO:0019953 sexual reproduction IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
MF GO:0042409 caffeoyl-CoA O-methyltransferase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0044703 multi-organism reproductive process IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0045703 ketoreductase activity IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
BP GO:0046520 sphingoid biosynthetic process IEP Neighborhood
BP GO:0048588 developmental cell growth IEP Neighborhood
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051235 maintenance of location IEP Neighborhood
BP GO:0051704 multi-organism process IEP Neighborhood
BP GO:0060560 developmental growth involved in morphogenesis IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
MF GO:0072533 tri-(coumaroyl or caffeoyl) spermidine meta-hydroxylase activity IEP Neighborhood
MF GO:0072547 tricoumaroylspermidine meta-hydroxylase activity IEP Neighborhood
MF GO:0072548 dicoumaroyl monocaffeoyl spermidine meta-hydroxylase activity IEP Neighborhood
MF GO:0072549 monocoumaroyl dicaffeoyl spermidine meta-hydroxylase activity IEP Neighborhood
MF GO:0080012 trihydroxyferuloyl spermidine O-methyltransferase activity IEP Neighborhood
MF GO:0080076 caffeoyl CoA:S-adenosyl-L-methionine O-methyltransferase activity IEP Neighborhood
MF GO:0080077 trihydroxyferuloyl spermidine:S-adenosyl-L-methionine O-methyltransferase activity IEP Neighborhood
MF GO:0080078 tricaffeoyl spermidine:S-adenosyl-L-methionine O-methyltransferase activity IEP Neighborhood
BP GO:0080088 spermidine hydroxycinnamate conjugate biosynthetic process IEP Neighborhood
BP GO:0097164 ammonium ion metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR012328 Chalcone/stilbene_synth_C 238 384
IPR001099 Chalcone/stilbene_synthase_N 9 229
No external refs found!