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  5. AT4G00315

AT4G00315


Description : F-box/RNI-like/FBD-like domains-containing protein


Gene families : OG0001094 (Archaeplastida) Phylogenetic Tree(s): OG0001094_tree ,
OG_05_0000663 (LandPlants) Phylogenetic Tree(s): OG_05_0000663_tree ,
OG_06_0000324 (SeedPlants) Phylogenetic Tree(s): OG_06_0000324_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G00315
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AT1G05080 No alias F-box/RNI-like/FBD-like domains-containing protein 0.06 Archaeplastida
AT1G50980 No alias F-box/RNI-like/FBD-like domains-containing protein 0.03 Archaeplastida
AT1G55030 No alias RNI-like superfamily protein 0.08 Archaeplastida
AT3G10750 No alias FBD domain family 0.06 Archaeplastida
AT3G49020 No alias FBD, F-box and Leucine Rich Repeat domains containing protein 0.07 Archaeplastida
AT3G49030 No alias FBD, F-box and Leucine Rich Repeat domains containing protein 0.04 Archaeplastida
AT3G49480 No alias Protein with RNI-like/FBD-like domains 0.03 Archaeplastida
AT3G52690 No alias RNI-like superfamily protein 0.08 Archaeplastida
AT4G15060 No alias CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596),... 0.02 Archaeplastida
AT4G26350 No alias F-box/RNI-like/FBD-like domains-containing protein 0.05 Archaeplastida
AT5G11370 No alias FBD / Leucine Rich Repeat domains containing protein 0.02 Archaeplastida
AT5G38570 No alias F-box/RNI-like superfamily protein 0.03 Archaeplastida
AT5G50270 No alias F-box/RNI-like/FBD-like domains-containing protein 0.03 Archaeplastida
AT5G52460 EDA41 FBD, F-box and Leucine Rich Repeat domains containing protein 0.04 Archaeplastida
AT5G56325 No alias FBD-like domain family protein 0.04 Archaeplastida
AT5G56390 No alias F-box/RNI-like/FBD-like domains-containing protein 0.07 Archaeplastida
AT5G56400 No alias FBD, F-box, Skp2-like and Leucine Rich Repeat domains... 0.07 Archaeplastida
AT5G56430 No alias F-box/FBD-like domains containing protein 0.07 Archaeplastida
AT5G56452 No alias FBD-like domain family protein 0.07 Archaeplastida
AT5G56560 No alias FBD, F-box and Leucine Rich Repeat domains containing protein 0.05 Archaeplastida
AT5G56570 No alias Leucine-rich repeat (LRR) family protein 0.04 Archaeplastida
AT5G56700 No alias FBD / Leucine Rich Repeat domains containing protein 0.04 Archaeplastida
AT5G62970 No alias Protein with RNI-like/FBD-like domains 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0009566 fertilization IEP Neighborhood
BP GO:0009567 double fertilization forming a zygote and endosperm IEP Neighborhood
BP GO:0032879 regulation of localization IEP Neighborhood
BP GO:0032880 regulation of protein localization IEP Neighborhood
BP GO:0043900 regulation of multi-organism process IEP Neighborhood
BP GO:0060341 regulation of cellular localization IEP Neighborhood
BP GO:0080154 regulation of fertilization IEP Neighborhood
BP GO:0080155 regulation of double fertilization forming a zygote and endosperm IEP Neighborhood
BP GO:1903827 regulation of cellular protein localization IEP Neighborhood
BP GO:2000008 regulation of protein localization to cell surface IEP Neighborhood
InterPro domains Description Start Stop
IPR006566 FBD 364 408
IPR001810 F-box_dom 4 39
IPR013101 Leu-rich_rpt_2 156 181
No external refs found!