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  5. Mp3g15890.1

Mp3g15890.1


Description : no hits & (original description: none)


Gene families : OG0001130 (Archaeplastida) Phylogenetic Tree(s): OG0001130_tree ,
OG_05_0001195 (LandPlants) Phylogenetic Tree(s): OG_05_0001195_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp3g15890.1
Cluster HCCA: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00165320 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
Cpa|evm.model.tig00000217.24 No alias Chromatin structure-remodeling complex protein SYD... 0.02 Archaeplastida
Cpa|evm.model.tig00020553.150 No alias No description available 0.02 Archaeplastida
Cre04.g225950 No alias No description available 0.02 Archaeplastida
Cre17.g711100 No alias No description available 0.02 Archaeplastida
Gb_27356 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os03g03870.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10428440g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c5_1040V3.1 No alias DNA-binding bromodomain-containing protein 0.03 Archaeplastida
Solyc06g051210.3.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc07g064700.4.1 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0016197 endosomal transport IEP Neighborhood
BP GO:0016482 cytosolic transport IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0042147 retrograde transport, endosome to Golgi IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001487 Bromodomain 227 308
No external refs found!