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  5. AT4G00460

AT4G00460 (ROPGEF3, ATROPGEF3)


Aliases : ROPGEF3, ATROPGEF3

Description : RHO guanyl-nucleotide exchange factor 3


Gene families : OG0000251 (Archaeplastida) Phylogenetic Tree(s): OG0000251_tree ,
OG_05_0010582 (LandPlants) Phylogenetic Tree(s): OG_05_0010582_tree ,
OG_06_0010259 (SeedPlants) Phylogenetic Tree(s): OG_06_0010259_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G00460
Cluster HCCA: Cluster_256

Target Alias Description ECC score Gene Family Method Actions
AT3G55660 ROPGEF6, ATROPGEF6 ROP (rho of plants) guanine nucleotide exchange factor 6 0.02 Archaeplastida
GSVIVT01023897001 No alias Multi-process regulation.Rop GTPase regulatory... 0.06 Archaeplastida
Gb_04468 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.02 Archaeplastida
Gb_24552 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.02 Archaeplastida
Gb_34956 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.03 Archaeplastida
LOC_Os05g38000.1 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.04 Archaeplastida
LOC_Os07g29780.2 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.04 Archaeplastida
Pp3c10_9910V3.1 No alias RHO guanyl-nucleotide exchange factor 7 0.02 Archaeplastida
Zm00001e015569_P002 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.02 Archaeplastida
Zm00001e034978_P001 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0004028 3-chloroallyl aldehyde dehydrogenase activity IEP Neighborhood
MF GO:0004029 aldehyde dehydrogenase (NAD) activity IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
CC GO:0005773 vacuole IEP Neighborhood
BP GO:0006970 response to osmotic stress IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
BP GO:0009269 response to desiccation IEP Neighborhood
BP GO:0009651 response to salt stress IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009737 response to abscisic acid IEP Neighborhood
BP GO:0009787 regulation of abscisic acid-activated signaling pathway IEP Neighborhood
BP GO:0009789 positive regulation of abscisic acid-activated signaling pathway IEP Neighborhood
BP GO:0009962 regulation of flavonoid biosynthetic process IEP Neighborhood
BP GO:0009963 positive regulation of flavonoid biosynthetic process IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0009967 positive regulation of signal transduction IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010647 positive regulation of cell communication IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016805 dipeptidase activity IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
BP GO:0023056 positive regulation of signaling IEP Neighborhood
BP GO:0033993 response to lipid IEP Neighborhood
MF GO:0046982 protein heterodimerization activity IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
BP GO:0048584 positive regulation of response to stimulus IEP Neighborhood
BP GO:0097305 response to alcohol IEP Neighborhood
BP GO:1901419 regulation of response to alcohol IEP Neighborhood
BP GO:1901421 positive regulation of response to alcohol IEP Neighborhood
BP GO:1905957 regulation of cellular response to alcohol IEP Neighborhood
BP GO:1905959 positive regulation of cellular response to alcohol IEP Neighborhood
InterPro domains Description Start Stop
IPR005512 PRONE_dom 104 319
No external refs found!