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  5. Mp3g22050.1

Mp3g22050.1


Description : histone H3 variant (CENH3)


Gene families : OG0000119 (Archaeplastida) Phylogenetic Tree(s): OG0000119_tree ,
OG_05_0000124 (LandPlants) Phylogenetic Tree(s): OG_05_0000124_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp3g22050.1
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00168040 No alias Chromatin organisation.histones.H3-type histone 0.03 Archaeplastida
AMTR_s00030p00044250 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
AT5G10400 No alias Histone superfamily protein 0.03 Archaeplastida
Cre06.g264650 No alias Chromatin organisation.histones.H3-type histone 0.01 Archaeplastida
Cre06.g265250 No alias Chromatin organisation.histones.H3-type histone 0.03 Archaeplastida
Cre06.g266650 No alias Chromatin organisation.histones.H3-type histone 0.03 Archaeplastida
Cre06.g267950 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Cre06.g268350 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Cre06.g274000 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Cre06.g274101 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Cre06.g274350 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Cre06.g274850 No alias Chromatin organisation.histones.H3-type histone 0.03 Archaeplastida
Cre06.g275750 No alias Chromatin organisation.histones.H3-type histone 0.03 Archaeplastida
Cre06.g276600 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Cre06.g276850 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Cre12.g504650 No alias Chromatin organisation.histones.H3-type histone 0.03 Archaeplastida
Cre12.g504800 No alias Chromatin organisation.histones.H3-type histone 0.03 Archaeplastida
Cre12.g505500 No alias Chromatin organisation.histones.H3-type histone 0.03 Archaeplastida
Cre12.g506300 No alias Chromatin organisation.histones.H3-type histone 0.03 Archaeplastida
Cre12.g506500 No alias Chromatin organisation.histones.H3-type histone 0.03 Archaeplastida
Cre13.g569950 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Cre17.g708150 No alias Chromatin organisation.histones.H3-type histone 0.03 Archaeplastida
Cre17.g708700 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Cre17.g709050 No alias Chromatin organisation.histones.H3-type histone 0.03 Archaeplastida
GSVIVT01025318001 No alias Histone H3.2 OS=Pisum sativum 0.03 Archaeplastida
GSVIVT01027073001 No alias Cell cycle.mitosis and meiosis.chromosome... 0.04 Archaeplastida
GSVIVT01032047001 No alias Histone H3 OS=Volvox carteri 0.02 Archaeplastida
GSVIVT01034510001 No alias Histone H3.2 OS=Pisum sativum 0.03 Archaeplastida
Gb_19430 No alias histone (H3) 0.03 Archaeplastida
Gb_27618 No alias histone (H3) 0.02 Archaeplastida
Gb_29026 No alias histone (H3) 0.04 Archaeplastida
Gb_29027 No alias histone (H3) 0.02 Archaeplastida
Gb_30564 No alias histone (H3) 0.03 Archaeplastida
Gb_36661 No alias histone (H3) 0.01 Archaeplastida
Gb_40804 No alias histone (H3) 0.02 Archaeplastida
LOC_Os01g64640.1 No alias histone (H3) 0.03 Archaeplastida
LOC_Os03g27310.2 No alias histone (H3) 0.03 Archaeplastida
LOC_Os04g34240.1 No alias histone (H3) 0.05 Archaeplastida
LOC_Os05g36280.1 No alias histone (H3) 0.02 Archaeplastida
LOC_Os05g41080.1 No alias histone H3 variant (CENH3) 0.03 Archaeplastida
LOC_Os06g04030.1 No alias histone (H3) 0.04 Archaeplastida
LOC_Os06g06460.1 No alias histone (H3) 0.03 Archaeplastida
LOC_Os06g06510.1 No alias histone (H3) 0.02 Archaeplastida
LOC_Os11g05730.1 No alias histone (H3) 0.04 Archaeplastida
MA_10432805g0020 No alias histone (H3) 0.04 Archaeplastida
MA_113838g0010 No alias histone (H3) 0.02 Archaeplastida
MA_125055g0020 No alias Histone H3.2 OS=Cichorium intybus (sp|q5mya4|h32_cicin : 122.0) 0.03 Archaeplastida
MA_1527811g0010 No alias No annotation 0.01 Archaeplastida
MA_159785g0010 No alias Histone H3.2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_17527g0010 No alias histone (H3) 0.01 Archaeplastida
MA_210354g0010 No alias histone (H3) 0.01 Archaeplastida
MA_222556g0010 No alias Histone H3.2 OS=Lilium longiflorum (sp|q402e1|h32_lillo : 116.0) 0.01 Archaeplastida
MA_356208g0010 No alias histone (H3) 0.03 Archaeplastida
MA_475294g0010 No alias histone (H3) 0.02 Archaeplastida
MA_561217g0010 No alias histone (H3) 0.02 Archaeplastida
MA_74555g0010 No alias Histone H3.2 OS=Pisum sativum (sp|p68427|h32_pea : 98.2) 0.04 Archaeplastida
MA_90399g0010 No alias histone (H3) 0.02 Archaeplastida
Pp3c23_15100V3.1 No alias Histone superfamily protein 0.02 Archaeplastida
Solyc01g074000.3.1 No alias histone (H3) 0.03 Archaeplastida
Solyc01g079110.4.1 No alias histone (H3) 0.03 Archaeplastida
Solyc01g080600.4.1 No alias histone (H3) 0.03 Archaeplastida
Solyc01g086820.4.1 No alias histone (H3) 0.03 Archaeplastida
Solyc02g077480.1.1 No alias histone (H3) 0.03 Archaeplastida
Solyc10g008910.1.1 No alias histone (H3) 0.02 Archaeplastida
Solyc11g010230.2.1 No alias histone (H3) 0.01 Archaeplastida
Solyc12g056540.1.1 No alias histone (H3) 0.05 Archaeplastida
Zm00001e007951_P001 No alias histone (H3) 0.02 Archaeplastida
Zm00001e008155_P001 No alias histone (H3) 0.02 Archaeplastida
Zm00001e008160_P001 No alias histone (H3) 0.02 Archaeplastida
Zm00001e014760_P001 No alias histone (H3) 0.02 Archaeplastida
Zm00001e016861_P001 No alias histone (H3) 0.03 Archaeplastida
Zm00001e018263_P001 No alias histone (H3) 0.02 Archaeplastida
Zm00001e019170_P001 No alias histone (H3) 0.03 Archaeplastida
Zm00001e036599_P001 No alias histone (H3) 0.02 Archaeplastida
Zm00001e040856_P001 No alias histone (H3) 0.03 Archaeplastida
Zm00001e040876_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Neighborhood
MF GO:0008373 sialyltransferase activity IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
BP GO:0042546 cell wall biogenesis IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 3 129
No external refs found!