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  5. Mp3g23720.1

Mp3g23720.1


Description : C3H zinc finger transcription factor


Gene families : OG0001822 (Archaeplastida) Phylogenetic Tree(s): OG0001822_tree ,
OG_05_0002566 (LandPlants) Phylogenetic Tree(s): OG_05_0002566_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp3g23720.1
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AT1G32360 No alias Zinc finger (CCCH-type) family protein 0.02 Archaeplastida
LOC_Os01g07930.1 No alias Zinc finger CCCH domain-containing protein 1 OS=Oryza... 0.02 Archaeplastida
Zm00001e040205_P001 No alias C3H zinc finger transcription factor 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006354 DNA-templated transcription, elongation IEP Neighborhood
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006497 protein lipidation IEP Neighborhood
BP GO:0006505 GPI anchor metabolic process IEP Neighborhood
BP GO:0006506 GPI anchor biosynthetic process IEP Neighborhood
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
CC GO:0008023 transcription elongation factor complex IEP Neighborhood
MF GO:0008375 acetylglucosaminyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
CC GO:0016593 Cdc73/Paf1 complex IEP Neighborhood
MF GO:0017176 phosphatidylinositol N-acetylglucosaminyltransferase activity IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0046474 glycerophospholipid biosynthetic process IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 161 186
IPR000571 Znf_CCCH 339 364
No external refs found!