Mp4g02150.1


Description : component alpha type-5 of 26S proteasome


Gene families : OG0003908 (Archaeplastida) Phylogenetic Tree(s): OG0003908_tree ,
OG_05_0004215 (LandPlants) Phylogenetic Tree(s): OG_05_0004215_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp4g02150.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00129p00081030 evm_27.TU.AmTr_v1... Protein degradation.26S proteasome.20S core... 0.05 Archaeplastida
AT1G53850 ATPAE1, PAE1 20S proteasome alpha subunit E1 0.09 Archaeplastida
AT3G14290 PAE2 20S proteasome alpha subunit E2 0.03 Archaeplastida
Cpa|evm.model.tig00000692.64 No alias Proteasome subunit alpha type-5 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
Cre17.g724350 No alias Protein degradation.26S proteasome.20S core... 0.15 Archaeplastida
GSVIVT01016670001 No alias Protein degradation.26S proteasome.20S core... 0.09 Archaeplastida
Gb_15656 No alias component alpha type-5 of 26S proteasome 0.06 Archaeplastida
LOC_Os11g40140.1 No alias component alpha type-5 of 26S proteasome 0.09 Archaeplastida
Pp3c14_23290V3.1 No alias 20S proteasome alpha subunit E2 0.08 Archaeplastida
Pp3c17_20640V3.1 No alias 20S proteasome alpha subunit E2 0.08 Archaeplastida
Pp3c1_36200V3.1 No alias 20S proteasome alpha subunit E2 0.01 Archaeplastida
Smo267349 No alias Protein degradation.26S proteasome.20S core... 0.03 Archaeplastida
Solyc02g070510.3.1 No alias component alpha type-5 of 26S proteasome 0.11 Archaeplastida
Solyc08g016510.3.1 No alias component alpha type-5 of 26S proteasome 0.06 Archaeplastida
Zm00001e000401_P001 No alias component alpha type-5 of 26S proteasome 0.14 Archaeplastida
Zm00001e038983_P001 No alias component alpha type-5 of 26S proteasome 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEA Interproscan
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
CC GO:0019773 proteasome core complex, alpha-subunit complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0003684 damaged DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0003954 NADH dehydrogenase activity IEP Neighborhood
BP GO:0006289 nucleotide-excision repair IEP Neighborhood
BP GO:0006405 RNA export from nucleus IEP Neighborhood
BP GO:0006406 mRNA export from nucleus IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006612 protein targeting to membrane IEP Neighborhood
BP GO:0006613 cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Neighborhood
MF GO:0008312 7S RNA binding IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Neighborhood
BP GO:0010498 proteasomal protein catabolic process IEP Neighborhood
BP GO:0015931 nucleobase-containing compound transport IEP Neighborhood
CC GO:0016272 prefoldin complex IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0030163 protein catabolic process IEP Neighborhood
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0043248 proteasome assembly IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
BP GO:0045047 protein targeting to ER IEP Neighborhood
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
CC GO:0048500 signal recognition particle IEP Neighborhood
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Neighborhood
BP GO:0050657 nucleic acid transport IEP Neighborhood
BP GO:0050658 RNA transport IEP Neighborhood
BP GO:0051028 mRNA transport IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
BP GO:0051168 nuclear export IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051236 establishment of RNA localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0070972 protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
CC GO:0097525 spliceosomal snRNP complex IEP Neighborhood
CC GO:0097526 spliceosomal tri-snRNP complex IEP Neighborhood
CC GO:0120114 Sm-like protein family complex IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 31 217
IPR000426 Proteasome_asu_N 8 30
No external refs found!