Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Gene families : OG0000509 (Archaeplastida) Phylogenetic Tree(s): OG0000509_tree ,
OG_05_0000283 (LandPlants) Phylogenetic Tree(s): OG_05_0000283_tree ,
OG_06_0042473 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AT4G01460 | |
Cluster | HCCA: Cluster_87 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
GSVIVT01013144001 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.04 | Archaeplastida | |
LOC_Os02g52190.1 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | ISS | Interproscan |
MF | GO:0003700 | DNA-binding transcription factor activity | ISS | Interproscan |
CC | GO:0005634 | nucleus | ISM | Interproscan |
BP | GO:0006355 | regulation of transcription, DNA-templated | TAS | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Neighborhood |
BP | GO:0006351 | transcription, DNA-templated | IEP | Neighborhood |
BP | GO:0006534 | cysteine metabolic process | IEP | Neighborhood |
BP | GO:0006816 | calcium ion transport | IEP | Neighborhood |
BP | GO:0007166 | cell surface receptor signaling pathway | IEP | Neighborhood |
BP | GO:0007167 | enzyme linked receptor protein signaling pathway | IEP | Neighborhood |
BP | GO:0007169 | transmembrane receptor protein tyrosine kinase signaling pathway | IEP | Neighborhood |
BP | GO:0008361 | regulation of cell size | IEP | Neighborhood |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:0009070 | serine family amino acid biosynthetic process | IEP | Neighborhood |
BP | GO:0009825 | multidimensional cell growth | IEP | Neighborhood |
BP | GO:0009914 | hormone transport | IEP | Neighborhood |
BP | GO:0009926 | auxin polar transport | IEP | Neighborhood |
BP | GO:0010015 | root morphogenesis | IEP | Neighborhood |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Neighborhood |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | Neighborhood |
BP | GO:0019344 | cysteine biosynthetic process | IEP | Neighborhood |
BP | GO:0032535 | regulation of cellular component size | IEP | Neighborhood |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Neighborhood |
BP | GO:0043473 | pigmentation | IEP | Neighborhood |
BP | GO:0043476 | pigment accumulation | IEP | Neighborhood |
BP | GO:0043478 | pigment accumulation in response to UV light | IEP | Neighborhood |
BP | GO:0043479 | pigment accumulation in tissues in response to UV light | IEP | Neighborhood |
BP | GO:0043480 | pigment accumulation in tissues | IEP | Neighborhood |
BP | GO:0043481 | anthocyanin accumulation in tissues in response to UV light | IEP | Neighborhood |
BP | GO:0048364 | root development | IEP | Neighborhood |
BP | GO:0048528 | post-embryonic root development | IEP | Neighborhood |
BP | GO:0048767 | root hair elongation | IEP | Neighborhood |
BP | GO:0060918 | auxin transport | IEP | Neighborhood |
BP | GO:0070509 | calcium ion import | IEP | Neighborhood |
BP | GO:0070838 | divalent metal ion transport | IEP | Neighborhood |
BP | GO:0072511 | divalent inorganic cation transport | IEP | Neighborhood |
BP | GO:0090066 | regulation of anatomical structure size | IEP | Neighborhood |
BP | GO:0090696 | post-embryonic plant organ development | IEP | Neighborhood |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | Neighborhood |
MF | GO:0097747 | RNA polymerase activity | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR011598 | bHLH_dom | 113 | 164 |
No external refs found! |