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  5. Mp4g04320.1

Mp4g04320.1


Description : component beta type-4 of 26S proteasome


Gene families : OG0003655 (Archaeplastida) Phylogenetic Tree(s): OG0003655_tree ,
OG_05_0004102 (LandPlants) Phylogenetic Tree(s): OG_05_0004102_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp4g04320.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00272080 evm_27.TU.AmTr_v1... Protein degradation.26S proteasome.20S core... 0.04 Archaeplastida
AT4G14800 PBD2 20S proteasome beta subunit D2 0.18 Archaeplastida
Cpa|evm.model.tig00020554.80 No alias Protein degradation.26S proteasome.20S core... 0.05 Archaeplastida
Cre14.g610950 No alias Protein degradation.26S proteasome.20S core... 0.16 Archaeplastida
GSVIVT01001182001 No alias Protein degradation.26S proteasome.20S core... 0.06 Archaeplastida
Gb_19480 No alias Proteasome subunit beta type-2-A OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_19481 No alias Proteasome subunit beta type-2-A OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os03g48930.1 No alias component beta type-4 of 26S proteasome 0.05 Archaeplastida
MA_119122g0010 No alias Proteasome subunit beta type-2-B OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_20372g0010 No alias Proteasome subunit beta type-2 OS=Oryza sativa subsp.... 0.04 Archaeplastida
Pp3c20_18180V3.1 No alias 20S proteasome beta subunit D1 0.07 Archaeplastida
Smo165201 No alias Protein degradation.26S proteasome.20S core... 0.04 Archaeplastida
Solyc09g082320.3.1 No alias component beta type-4 of 26S proteasome 0.17 Archaeplastida
Zm00001e005337_P001 No alias component beta type-4 of 26S proteasome 0.04 Archaeplastida
Zm00001e012245_P001 No alias component beta type-4 of 26S proteasome 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
BP GO:0006405 RNA export from nucleus IEP Neighborhood
BP GO:0006406 mRNA export from nucleus IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006612 protein targeting to membrane IEP Neighborhood
BP GO:0006613 cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
CC GO:0008250 oligosaccharyltransferase complex IEP Neighborhood
MF GO:0008312 7S RNA binding IEP Neighborhood
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0015931 nucleobase-containing compound transport IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
CC GO:0016272 prefoldin complex IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0043248 proteasome assembly IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
BP GO:0045047 protein targeting to ER IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
CC GO:0048500 signal recognition particle IEP Neighborhood
BP GO:0050657 nucleic acid transport IEP Neighborhood
BP GO:0050658 RNA transport IEP Neighborhood
BP GO:0051028 mRNA transport IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
BP GO:0051168 nuclear export IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051236 establishment of RNA localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0070972 protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 3 182
No external refs found!