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  5. Mp4g06050.1

Mp4g06050.1


Description : small subunit of ribulose-1,5-bisphosphat carboxylase/oxygenase heterodimer


Gene families : OG0000561 (Archaeplastida) Phylogenetic Tree(s): OG0000561_tree ,
OG_05_0000421 (LandPlants) Phylogenetic Tree(s): OG_05_0000421_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp4g06050.1
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00061090 evm_27.TU.AmTr_v1... Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.03 Archaeplastida
AT1G67090 RBCS1A ribulose bisphosphate carboxylase small chain 1A 0.04 Archaeplastida
AT5G38410 No alias Ribulose bisphosphate carboxylase (small chain) family protein 0.03 Archaeplastida
AT5G38420 No alias Ribulose bisphosphate carboxylase (small chain) family protein 0.04 Archaeplastida
Cre02.g120100 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.08 Archaeplastida
GSVIVT01008288001 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.03 Archaeplastida
Gb_00380 No alias small subunit of ribulose-1,5-bisphosphat... 0.04 Archaeplastida
LOC_Os12g17600.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.08 Archaeplastida
LOC_Os12g19381.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.05 Archaeplastida
LOC_Os12g19470.2 No alias small subunit of ribulose-1,5-bisphosphat... 0.06 Archaeplastida
MA_47626g0010 No alias small subunit of ribulose-1,5-bisphosphat... 0.04 Archaeplastida
Mp4g09890.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.03 Archaeplastida
Pp3c13_15786V3.1 No alias No annotation 0.02 Archaeplastida
Pp3c13_15800V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.06 Archaeplastida
Pp3c13_15980V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.09 Archaeplastida
Pp3c13_16000V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.05 Archaeplastida
Pp3c15_22720V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.04 Archaeplastida
Pp3c19_1840V3.1 No alias Ribulose bisphosphate carboxylase (small chain) family protein 0.02 Archaeplastida
Pp3c3_14510V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.04 Archaeplastida
Pp3c3_18750V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.02 Archaeplastida
Pp3c3_20140V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.05 Archaeplastida
Smo147927 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.05 Archaeplastida
Solyc02g063150.3.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.02 Archaeplastida
Solyc02g085950.4.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.04 Archaeplastida
Solyc03g034220.3.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.05 Archaeplastida
Zm00001e009125_P001 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e024168_P001 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
CC GO:0005886 plasma membrane IEP Neighborhood
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0098809 nitrite reductase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR000894 RuBisCO_sc_dom 71 179
No external refs found!