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  5. Mp4g09280.1

Mp4g09280.1


Description : Protein CHROMATIN REMODELING 35 OS=Arabidopsis thaliana (sp|q9siw2|chr35_arath : 282.0)


Gene families : OG0000450 (Archaeplastida) Phylogenetic Tree(s): OG0000450_tree ,
OG_05_0001964 (LandPlants) Phylogenetic Tree(s): OG_05_0001964_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp4g09280.1
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00142p00075140 evm_27.TU.AmTr_v1... SNF2 domain-containing protein CLASSY 3 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT2G16390 DMS1, DRD1, CHR35 SNF2 domain-containing protein / helicase... 0.04 Archaeplastida
AT2G21455 No alias No description available 0.02 Archaeplastida
GSVIVT01023832001 No alias Protein CHROMATIN REMODELING 35 OS=Arabidopsis thaliana 0.01 Archaeplastida
GSVIVT01024225001 No alias Chromatin organisation.DNA methylation.canonical... 0.02 Archaeplastida
GSVIVT01024512001 No alias Protein CHROMATIN REMODELING 35 OS=Arabidopsis thaliana 0.02 Archaeplastida
LOC_Os06g14440.1 No alias chromatin remodeling factor (DRD1). component DRD1 of... 0.01 Archaeplastida
Pp3c2_3510V3.1 No alias SNF2 domain-containing protein / helicase... 0.03 Archaeplastida
Solyc01g068300.3.1 No alias RDR2-polymerase regulator protein CLSY3/4 0.02 Archaeplastida
Solyc01g068320.3.1 No alias RDR2-polymerase regulator protein CLSY3/4 0.02 Archaeplastida
Solyc08g077600.1.1 No alias SNF2 domain-containing protein CLASSY 3 OS=Arabidopsis... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004096 catalase activity IEP Neighborhood
CC GO:0005672 transcription factor TFIIA complex IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001650 Helicase_C 902 1027
IPR000330 SNF2_N 535 814
No external refs found!