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  5. Mp4g13200.1

Mp4g13200.1


Description : DEAD-box ATP-dependent RNA helicase 1 OS=Arabidopsis thaliana (sp|q7fgz2|rh1_arath : 134.0)


Gene families : OG0002483 (Archaeplastida) Phylogenetic Tree(s): OG0002483_tree ,
OG_05_0002637 (LandPlants) Phylogenetic Tree(s): OG_05_0002637_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp4g13200.1
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
Mp4g13170.1 No alias DEAD-box ATP-dependent RNA helicase 1 OS=Oryza sativa... 0.07 Archaeplastida
Mp4g13210.1 No alias DEAD-box ATP-dependent RNA helicase 1 OS=Arabidopsis... 0.07 Archaeplastida
Mp4g13270.1 No alias DEAD-box ATP-dependent RNA helicase 1 OS=Arabidopsis... 0.1 Archaeplastida
Mp4g13330.1 No alias DEAD-box ATP-dependent RNA helicase 1 OS=Arabidopsis... 0.12 Archaeplastida
Mp8g04910.1 No alias DEAD-box ATP-dependent RNA helicase 1 OS=Arabidopsis... 0.05 Archaeplastida
MpVg00890.2 No alias No annotation 0.08 Archaeplastida
MpVg00920.1 No alias No annotation 0.06 Archaeplastida
Mpzg00070.1 No alias DEAD-box ATP-dependent RNA helicase 1 OS=Arabidopsis... 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001650 Helicase_C 133 182
IPR011545 DEAD/DEAH_box_helicase_dom 12 107
No external refs found!