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Description : component BAF60 of chromatin remodeling complex
Gene families : OG0003643 (Archaeplastida) Phylogenetic Tree(s): OG0003643_tree ,
OG_05_0004669 (LandPlants) Phylogenetic Tree(s): OG_05_0004669_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Mp4g15340.1 | |
| Cluster | HCCA: Cluster_158 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00013p00219800 | evm_27.TU.AmTr_v1... | Chromatin organisation.chromatin remodeling... | 0.02 | Archaeplastida | |
| Cpa|evm.model.tig00021326.23 | No alias | Chromatin organisation.chromatin remodeling... | 0.02 | Archaeplastida | |
| Cre10.g448700 | No alias | Chromatin organisation.chromatin remodeling... | 0.04 | Archaeplastida | |
| LOC_Os04g31320.1 | No alias | component BAF60 of chromatin remodeling complex | 0.02 | Archaeplastida | |
| MA_10426077g0010 | No alias | component BAF60 of chromatin remodeling complex | 0.03 | Archaeplastida | |
| Solyc03g111250.3.1 | No alias | component BAF60 of chromatin remodeling complex | 0.02 | Archaeplastida | |
| Zm00001e035701_P001 | No alias | component BAF60 of chromatin remodeling complex | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000347 | THO complex | IEP | Neighborhood |
| CC | GO:0000445 | THO complex part of transcription export complex | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0004057 | arginyltransferase activity | IEP | Neighborhood |
| MF | GO:0004066 | asparagine synthase (glutamine-hydrolyzing) activity | IEP | Neighborhood |
| MF | GO:0004386 | helicase activity | IEP | Neighborhood |
| MF | GO:0004518 | nuclease activity | IEP | Neighborhood |
| MF | GO:0004527 | exonuclease activity | IEP | Neighborhood |
| MF | GO:0004814 | arginine-tRNA ligase activity | IEP | Neighborhood |
| BP | GO:0006367 | transcription initiation from RNA polymerase II promoter | IEP | Neighborhood |
| BP | GO:0006420 | arginyl-tRNA aminoacylation | IEP | Neighborhood |
| BP | GO:0006528 | asparagine metabolic process | IEP | Neighborhood |
| BP | GO:0006529 | asparagine biosynthetic process | IEP | Neighborhood |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
| BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0006783 | heme biosynthetic process | IEP | Neighborhood |
| BP | GO:0006784 | heme a biosynthetic process | IEP | Neighborhood |
| BP | GO:0006914 | autophagy | IEP | Neighborhood |
| MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
| MF | GO:0008641 | ubiquitin-like modifier activating enzyme activity | IEP | Neighborhood |
| BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Neighborhood |
| BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | Neighborhood |
| BP | GO:0009143 | nucleoside triphosphate catabolic process | IEP | Neighborhood |
| BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
| BP | GO:0016598 | protein arginylation | IEP | Neighborhood |
| MF | GO:0016755 | transferase activity, transferring amino-acyl groups | IEP | Neighborhood |
| MF | GO:0016874 | ligase activity | IEP | Neighborhood |
| MF | GO:0016877 | ligase activity, forming carbon-sulfur bonds | IEP | Neighborhood |
| MF | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor | IEP | Neighborhood |
| CC | GO:0033643 | host cell part | IEP | Neighborhood |
| CC | GO:0033646 | host intracellular part | IEP | Neighborhood |
| CC | GO:0033647 | host intracellular organelle | IEP | Neighborhood |
| CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0042025 | host cell nucleus | IEP | Neighborhood |
| BP | GO:0042168 | heme metabolic process | IEP | Neighborhood |
| BP | GO:0042440 | pigment metabolic process | IEP | Neighborhood |
| BP | GO:0043085 | positive regulation of catalytic activity | IEP | Neighborhood |
| BP | GO:0044093 | positive regulation of molecular function | IEP | Neighborhood |
| CC | GO:0044217 | other organism part | IEP | Neighborhood |
| BP | GO:0046148 | pigment biosynthetic process | IEP | Neighborhood |
| BP | GO:0046160 | heme a metabolic process | IEP | Neighborhood |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
| MF | GO:0047429 | nucleoside-triphosphate diphosphatase activity | IEP | Neighborhood |
| BP | GO:0061919 | process utilizing autophagic mechanism | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003121 | SWIB_MDM2_domain | 303 | 375 |
| No external refs found! |