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  5. Mp4g15800.1

Mp4g15800.1


Description : component RPL5 of LSU proteome component


Gene families : OG0002752 (Archaeplastida) Phylogenetic Tree(s): OG0002752_tree ,
OG_05_0002866 (LandPlants) Phylogenetic Tree(s): OG_05_0002866_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp4g15800.1
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00162800 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.11 Archaeplastida
AT3G25520 OLI5, RPL5A, PGY3, ATL5 ribosomal protein L5 0.48 Archaeplastida
AT5G39740 OLI7, RPL5B ribosomal protein L5 B 0.49 Archaeplastida
Cpa|evm.model.tig00000194.49 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.41 Archaeplastida
Cre14.g621450 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.18 Archaeplastida
GSVIVT01038188001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.2 Archaeplastida
Gb_16695 No alias component RPL5 of LSU proteome component 0.14 Archaeplastida
LOC_Os01g67134.1 No alias component RPL5 of LSU proteome component 0.35 Archaeplastida
MA_70965g0010 No alias component RPL5 of LSU proteome component 0.22 Archaeplastida
Pp3c11_6420V3.1 No alias ribosomal protein L5 B 0.32 Archaeplastida
Pp3c1_7160V3.1 No alias ribosomal protein L5 B 0.2 Archaeplastida
Pp3c2_31540V3.1 No alias ribosomal protein L5 B 0.13 Archaeplastida
Pp3c7_25660V3.1 No alias ribosomal protein L5 B 0.27 Archaeplastida
Smo144921 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.18 Archaeplastida
Solyc06g007670.4.1 No alias component RPL5 of LSU proteome component 0.44 Archaeplastida
Solyc06g082870.4.1 No alias component RPL5 of LSU proteome component 0.23 Archaeplastida
Solyc09g020130.3.1 No alias component RPL5 of LSU proteome component 0.23 Archaeplastida
Zm00001e000256_P001 No alias component RPL5 of LSU proteome component 0.26 Archaeplastida
Zm00001e018972_P001 No alias component RPL5 of LSU proteome component 0.2 Archaeplastida
Zm00001e028563_P004 No alias component RPL5 of LSU proteome component 0.36 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
MF GO:0008097 5S rRNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004129 cytochrome-c oxidase activity IEP Neighborhood
MF GO:0004455 ketol-acid reductoisomerase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005740 mitochondrial envelope IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
BP GO:0009081 branched-chain amino acid metabolic process IEP Neighborhood
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Neighborhood
BP GO:0009555 pollen development IEP Neighborhood
MF GO:0015002 heme-copper terminal oxidase activity IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Neighborhood
MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0019829 cation-transporting ATPase activity IEP Neighborhood
MF GO:0022853 active ion transmembrane transporter activity IEP Neighborhood
CC GO:0031967 organelle envelope IEP Neighborhood
CC GO:0031975 envelope IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Neighborhood
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Neighborhood
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Neighborhood
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Neighborhood
BP GO:0048229 gametophyte development IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
InterPro domains Description Start Stop
IPR025607 Rbsml_L5e/L18P_C 191 280
IPR005485 Rbsml_L5_euk/L18_arc 14 175
No external refs found!