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  5. Mp4g20670.1

Mp4g20670.1


Description : SYP1-group Qa-type SNARE component


Gene families : OG0000372 (Archaeplastida) Phylogenetic Tree(s): OG0000372_tree ,
OG_05_0000804 (LandPlants) Phylogenetic Tree(s): OG_05_0000804_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp4g20670.1
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g11890.1 No alias SYP1-group Qa-type SNARE component 0.02 Archaeplastida
MA_28961g0010 No alias SYP1-group Qa-type SNARE component 0.02 Archaeplastida
Mp7g04280.1 No alias SYP1-group Qa-type SNARE component 0.03 Archaeplastida
Smo74098 No alias Vesicle trafficking.SNARE target membrane recognition... 0.02 Archaeplastida
Solyc01g006950.3.1 No alias SYP1-group Qa-type SNARE component 0.03 Archaeplastida
Zm00001e035135_P001 No alias SYP1-group Qa-type SNARE component 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003993 acid phosphatase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004555 alpha,alpha-trehalase activity IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006787 porphyrin-containing compound catabolic process IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
MF GO:0015927 trehalase activity IEP Neighborhood
BP GO:0015994 chlorophyll metabolic process IEP Neighborhood
BP GO:0015996 chlorophyll catabolic process IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033015 tetrapyrrole catabolic process IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
BP GO:0046149 pigment catabolic process IEP Neighborhood
MF GO:0047746 chlorophyllase activity IEP Neighborhood
BP GO:0051187 cofactor catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006011 Syntaxin_N 40 245
IPR000727 T_SNARE_dom 247 297
No external refs found!