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  5. Mp4g21410.1

Mp4g21410.1


Description : Pentatricopeptide repeat-containing protein At5g67570, chloroplastic OS=Arabidopsis thaliana (sp|q9fjw6|pp451_arath : 354.0)


Gene families : OG0003182 (Archaeplastida) Phylogenetic Tree(s): OG0003182_tree ,
OG_05_0003613 (LandPlants) Phylogenetic Tree(s): OG_05_0003613_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp4g21410.1
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00155p00027590 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g30610,... 0.03 Archaeplastida
AT1G30610 EMB2279, EMB88 pentatricopeptide (PPR) repeat-containing protein 0.03 Archaeplastida
GSVIVT01004304001 No alias Protein biosynthesis.organelle translation... 0.02 Archaeplastida
GSVIVT01021752001 No alias Pentatricopeptide repeat-containing protein At1g30610,... 0.03 Archaeplastida
Gb_37099 No alias Pentatricopeptide repeat-containing protein At5g67570,... 0.02 Archaeplastida
LOC_Os01g48380.1 No alias Pentatricopeptide repeat-containing protein At1g30610,... 0.02 Archaeplastida
LOC_Os05g25060.1 No alias Pentatricopeptide repeat-containing protein At5g67570,... 0.01 Archaeplastida
MA_10429917g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10429917g0020 No alias Pentatricopeptide repeat-containing protein At1g30610,... 0.04 Archaeplastida
MA_10434636g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_110053g0010 No alias Pentatricopeptide repeat-containing protein At5g67570,... 0.03 Archaeplastida
MA_13800g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c10_24670V3.1 No alias pentatricopeptide (PPR) repeat-containing protein 0.03 Archaeplastida
Solyc02g092310.4.1 No alias Pentatricopeptide repeat-containing protein At5g67570,... 0.04 Archaeplastida
Solyc02g092320.2.1 No alias Pentatricopeptide repeat-containing protein At5g67570,... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0001871 pattern binding IEP Neighborhood
BP GO:0002790 peptide secretion IEP Neighborhood
MF GO:0003747 translation release factor activity IEP Neighborhood
MF GO:0003873 6-phosphofructo-2-kinase activity IEP Neighborhood
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004565 beta-galactosidase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
MF GO:0005534 galactose binding IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
CC GO:0005887 integral component of plasma membrane IEP Neighborhood
BP GO:0006000 fructose metabolic process IEP Neighborhood
BP GO:0006265 DNA topological change IEP Neighborhood
BP GO:0006415 translational termination IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006766 vitamin metabolic process IEP Neighborhood
BP GO:0006767 water-soluble vitamin metabolic process IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008443 phosphofructokinase activity IEP Neighborhood
BP GO:0009110 vitamin biosynthetic process IEP Neighborhood
BP GO:0009119 ribonucleoside metabolic process IEP Neighborhood
BP GO:0009235 cobalamin metabolic process IEP Neighborhood
BP GO:0009236 cobalamin biosynthetic process IEP Neighborhood
BP GO:0009306 protein secretion IEP Neighborhood
CC GO:0009341 beta-galactosidase complex IEP Neighborhood
MF GO:0015925 galactosidase activity IEP Neighborhood
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019200 carbohydrate kinase activity IEP Neighborhood
BP GO:0022411 cellular component disassembly IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
CC GO:0031226 intrinsic component of plasma membrane IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
BP GO:0032984 protein-containing complex disassembly IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0042278 purine nucleoside metabolic process IEP Neighborhood
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043624 cellular protein complex disassembly IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0046128 purine ribonucleoside metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
MF GO:0048029 monosaccharide binding IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
BP GO:0071586 CAAX-box protein processing IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
BP GO:1901068 guanosine-containing compound metabolic process IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
MF GO:2001070 starch binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 533 561
IPR002885 Pentatricopeptide_repeat 378 405
IPR002885 Pentatricopeptide_repeat 683 712
IPR002885 Pentatricopeptide_repeat 457 507
IPR002885 Pentatricopeptide_repeat 601 646
No external refs found!