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  5. Mp4g22150.1

Mp4g22150.1


Description : component RPS21 of SSU proteome


Gene families : OG0002316 (Archaeplastida) Phylogenetic Tree(s): OG0002316_tree ,
OG_05_0003260 (LandPlants) Phylogenetic Tree(s): OG_05_0003260_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp4g22150.1
Cluster HCCA: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00256280 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 Archaeplastida
AMTR_s00045p00200410 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 Archaeplastida
AT3G53890 No alias Ribosomal protein S21e 0.16 Archaeplastida
AT5G27700 No alias Ribosomal protein S21e 0.12 Archaeplastida
Cpa|evm.model.tig00020780.14 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 Archaeplastida
Cre03.g203450 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.16 Archaeplastida
GSVIVT01017756001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.18 Archaeplastida
GSVIVT01031151001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.16 Archaeplastida
Gb_27652 No alias component RPS21 of SSU proteome 0.09 Archaeplastida
Gb_35516 No alias component RPS21 of SSU proteome 0.06 Archaeplastida
LOC_Os03g46490.1 No alias component RPS21 of SSU proteome 0.07 Archaeplastida
MA_21647g0010 No alias component RPS21 of SSU proteome 0.02 Archaeplastida
MA_73657g0010 No alias component RPS21 of SSU proteome 0.06 Archaeplastida
Pp3c12_25030V3.1 No alias Ribosomal protein S21e 0.09 Archaeplastida
Pp3c24_8160V3.1 No alias Ribosomal protein S21e 0.03 Archaeplastida
Pp3c26_3000V3.1 No alias Ribosomal protein S21e 0.06 Archaeplastida
Pp3c4_3220V3.1 No alias Ribosomal protein S21e 0.15 Archaeplastida
Smo271040 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.08 Archaeplastida
Solyc01g066840.3.1 No alias component RPS21 of SSU proteome 0.05 Archaeplastida
Solyc04g074910.3.1 No alias component RPS21 of SSU proteome 0.09 Archaeplastida
Zm00001e001637_P002 No alias component RPS21 of SSU proteome 0.15 Archaeplastida
Zm00001e011684_P002 No alias component RPS21 of SSU proteome 0.1 Archaeplastida
Zm00001e031393_P002 No alias component RPS21 of SSU proteome 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
CC GO:0005743 mitochondrial inner membrane IEP Neighborhood
CC GO:0005750 mitochondrial respiratory chain complex III IEP Neighborhood
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
BP GO:0008535 respiratory chain complex IV assembly IEP Neighborhood
BP GO:0017004 cytochrome complex assembly IEP Neighborhood
CC GO:0019866 organelle inner membrane IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
BP GO:0022904 respiratory electron transport chain IEP Neighborhood
MF GO:0030515 snoRNA binding IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP Neighborhood
BP GO:0033617 mitochondrial respiratory chain complex IV assembly IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
CC GO:0045275 respiratory chain complex III IEP Neighborhood
CC GO:0070069 cytochrome complex IEP Neighborhood
CC GO:0070469 respiratory chain IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
CC GO:0098803 respiratory chain complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001931 Ribosomal_S21e 1 76
No external refs found!