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AT4G03180


Description : CONTAINS InterPro DOMAIN/s: rRNA processing (InterPro:IPR013730); Has 898 Blast hits to 687 proteins in 142 species: Archae - 2; Bacteria - 28; Metazoa - 200; Fungi - 99; Plants - 63; Viruses - 0; Other Eukaryotes - 506 (source: NCBI BLink).


Gene families : OG0008588 (Archaeplastida) Phylogenetic Tree(s): OG0008588_tree ,
OG_05_0008495 (LandPlants) Phylogenetic Tree(s): OG_05_0008495_tree ,
OG_06_0008786 (SeedPlants) Phylogenetic Tree(s): OG_06_0008786_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G03180
Cluster HCCA: Cluster_230

Target Alias Description ECC score Gene Family Method Actions
Pp3c9_10530V3.1 No alias No annotation 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000003 reproduction IEP Neighborhood
BP GO:0006626 protein targeting to mitochondrion IEP Neighborhood
BP GO:0006839 mitochondrial transport IEP Neighborhood
BP GO:0007623 circadian rhythm IEP Neighborhood
BP GO:0008284 positive regulation of cell proliferation IEP Neighborhood
BP GO:0009560 embryo sac egg cell differentiation IEP Neighborhood
BP GO:0009908 flower development IEP Neighborhood
BP GO:0010073 meristem maintenance IEP Neighborhood
BP GO:0010093 specification of floral organ identity IEP Neighborhood
BP GO:0019953 sexual reproduction IEP Neighborhood
BP GO:0030154 cell differentiation IEP Neighborhood
BP GO:0042127 regulation of cell proliferation IEP Neighborhood
BP GO:0044703 multi-organism reproductive process IEP Neighborhood
BP GO:0048316 seed development IEP Neighborhood
BP GO:0048481 plant ovule development IEP Neighborhood
BP GO:0048511 rhythmic process IEP Neighborhood
BP GO:0070585 protein localization to mitochondrion IEP Neighborhood
BP GO:0072655 establishment of protein localization to mitochondrion IEP Neighborhood
BP GO:0090567 reproductive shoot system development IEP Neighborhood
BP GO:0090701 specification of plant organ identity IEP Neighborhood
InterPro domains Description Start Stop
IPR013730 Fyv7/TAP26 53 177
No external refs found!