Mp4g23990.1


Description : component RPL10 of LSU proteome component


Gene families : OG0002582 (Archaeplastida) Phylogenetic Tree(s): OG0002582_tree ,
OG_05_0002513 (LandPlants) Phylogenetic Tree(s): OG_05_0002513_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp4g23990.1
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00072p00080890 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.11 Archaeplastida
AMTR_s00077p00151750 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.11 Archaeplastida
AT1G14320 SAC52, RPL10, RPL10A Ribosomal protein L16p/L10e family protein 0.5 Archaeplastida
AT1G26910 RPL10B Ribosomal protein L16p/L10e family protein 0.05 Archaeplastida
Cpa|evm.model.tig00001424.5 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.27 Archaeplastida
GSVIVT01001137001 No alias 60S ribosomal protein L10 OS=Vitis riparia 0.22 Archaeplastida
GSVIVT01024537001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.09 Archaeplastida
Gb_06067 No alias component RPL10 of LSU proteome component 0.2 Archaeplastida
LOC_Os11g11390.1 No alias component RPL10 of LSU proteome component 0.18 Archaeplastida
MA_17326g0010 No alias component RPL10 of LSU proteome component 0.32 Archaeplastida
Pp3c11_4130V3.1 No alias Ribosomal protein L16p/L10e family protein 0.3 Archaeplastida
Pp3c1_3170V3.1 No alias Ribosomal protein L16p/L10e family protein 0.38 Archaeplastida
Pp3c2_29600V3.1 No alias Ribosomal protein L16p/L10e family protein 0.47 Archaeplastida
Pp3c7_22400V3.1 No alias Ribosomal protein L16p/L10e family protein 0.31 Archaeplastida
Smo437527 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.12 Archaeplastida
Solyc06g007520.4.1 No alias component RPL10 of LSU proteome component 0.53 Archaeplastida
Solyc06g082650.4.1 No alias component RPL10 of LSU proteome component 0.57 Archaeplastida
Solyc06g082670.3.1 No alias component RPL10 of LSU proteome component 0.45 Archaeplastida
Zm00001e004933_P001 No alias component RPL10 of LSU proteome component 0.19 Archaeplastida
Zm00001e012474_P002 No alias component RPL10 of LSU proteome component 0.12 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
MF GO:0004129 cytochrome-c oxidase activity IEP Neighborhood
CC GO:0005740 mitochondrial envelope IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
MF GO:0008097 5S rRNA binding IEP Neighborhood
BP GO:0009555 pollen development IEP Neighborhood
MF GO:0015002 heme-copper terminal oxidase activity IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Neighborhood
MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
CC GO:0031967 organelle envelope IEP Neighborhood
CC GO:0031975 envelope IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
BP GO:0048229 gametophyte development IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
InterPro domains Description Start Stop
IPR016180 Ribosomal_L10e/L16 12 166
No external refs found!