Mp5g01600.1

Description : transcription factor (KNOX)

Gene families : OG0000263 (Archaeplastida) Phylogenetic Tree(s): OG0000263_tree ,
OG_05_0000128 (LandPlants) Phylogenetic Tree(s): OG_05_0000128_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Mp5g01600.1
Cluster	HCCA: Cluster_102

Target	Alias	Description	ECC score	Gene Family Method
AT5G25220	KNAT3	KNOTTED1-like homeobox gene 3	0.02	Archaeplastida
GSVIVT01018257001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.02	Archaeplastida
LOC_Os03g51690.2	No alias	transcription factor (KNOX)	0.02	Archaeplastida
LOC_Os03g51710.1	No alias	transcription factor (KNOX)	0.02	Archaeplastida
LOC_Os05g03884.1	No alias	transcription factor (KNOX)	0.02	Archaeplastida
Pp3c18_18720V3.1	No alias	KNOTTED-like from Arabidopsis thaliana 2	0.02	Archaeplastida
Pp3c18_18750V3.1	No alias	KNOTTED1-like homeobox gene 6	0.04	Archaeplastida
Pp3c19_5610V3.1	No alias	No annotation	0.03	Archaeplastida
Pp3c19_5620V3.1	No alias	KNOTTED-like from Arabidopsis thaliana 2	0.03	Archaeplastida
Pp3c21_10320V3.1	No alias	KNOTTED-like from Arabidopsis thaliana 2	0.02	Archaeplastida
Solyc01g100510.4.1	No alias	transcription factor (KNOX)	0.02	Archaeplastida
Solyc02g081120.4.1	No alias	transcription factor (KNOX)	0.02	Archaeplastida
Solyc12g010410.3.1	No alias	transcription factor (KNOX)	0.03	Archaeplastida
Zm00001e005545_P001	No alias	transcription factor (KNOX)	0.02	Archaeplastida
Zm00001e025100_P003	No alias	transcription factor (KNOX)	0.02	Archaeplastida
Zm00001e032761_P001	No alias	transcription factor (KNOX)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004674	protein serine/threonine kinase activity	IEP	Neighborhood
CC	GO:0005667	transcription factor complex	IEP	Neighborhood
CC	GO:0005672	transcription factor TFIIA complex	IEP	Neighborhood
BP	GO:0006298	mismatch repair	IEP	Neighborhood
BP	GO:0006367	transcription initiation from RNA polymerase II promoter	IEP	Neighborhood
BP	GO:0009892	negative regulation of metabolic process	IEP	Neighborhood
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	Neighborhood
BP	GO:0010629	negative regulation of gene expression	IEP	Neighborhood
BP	GO:0016458	gene silencing	IEP	Neighborhood
CC	GO:0016459	myosin complex	IEP	Neighborhood
MF	GO:0030983	mismatched DNA binding	IEP	Neighborhood
BP	GO:0031047	gene silencing by RNA	IEP	Neighborhood
BP	GO:0032774	RNA biosynthetic process	IEP	Neighborhood
CC	GO:0044798	nuclear transcription factor complex	IEP	Neighborhood
BP	GO:0048519	negative regulation of biological process	IEP	Neighborhood
CC	GO:0090575	RNA polymerase II transcription factor complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR008422	Homeobox_KN_domain	545	584

External Links

No external refs found!