Description : transcription factor (KNOX)
Gene families : OG0000263 (Archaeplastida) Phylogenetic Tree(s): OG0000263_tree ,
OG_05_0000128 (LandPlants) Phylogenetic Tree(s): OG_05_0000128_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Mp5g01600.1 | |
Cluster | HCCA: Cluster_102 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT5G25220 | KNAT3 | KNOTTED1-like homeobox gene 3 | 0.02 | Archaeplastida | |
GSVIVT01018257001 | No alias | RNA biosynthesis.transcriptional activation.HB... | 0.02 | Archaeplastida | |
LOC_Os03g51690.2 | No alias | transcription factor (KNOX) | 0.02 | Archaeplastida | |
LOC_Os03g51710.1 | No alias | transcription factor (KNOX) | 0.02 | Archaeplastida | |
LOC_Os05g03884.1 | No alias | transcription factor (KNOX) | 0.02 | Archaeplastida | |
Pp3c18_18720V3.1 | No alias | KNOTTED-like from Arabidopsis thaliana 2 | 0.02 | Archaeplastida | |
Pp3c18_18750V3.1 | No alias | KNOTTED1-like homeobox gene 6 | 0.04 | Archaeplastida | |
Pp3c19_5610V3.1 | No alias | No annotation | 0.03 | Archaeplastida | |
Pp3c19_5620V3.1 | No alias | KNOTTED-like from Arabidopsis thaliana 2 | 0.03 | Archaeplastida | |
Pp3c21_10320V3.1 | No alias | KNOTTED-like from Arabidopsis thaliana 2 | 0.02 | Archaeplastida | |
Solyc01g100510.4.1 | No alias | transcription factor (KNOX) | 0.02 | Archaeplastida | |
Solyc02g081120.4.1 | No alias | transcription factor (KNOX) | 0.02 | Archaeplastida | |
Solyc12g010410.3.1 | No alias | transcription factor (KNOX) | 0.03 | Archaeplastida | |
Zm00001e005545_P001 | No alias | transcription factor (KNOX) | 0.02 | Archaeplastida | |
Zm00001e025100_P003 | No alias | transcription factor (KNOX) | 0.02 | Archaeplastida | |
Zm00001e032761_P001 | No alias | transcription factor (KNOX) | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004674 | protein serine/threonine kinase activity | IEP | Neighborhood |
CC | GO:0005667 | transcription factor complex | IEP | Neighborhood |
CC | GO:0005672 | transcription factor TFIIA complex | IEP | Neighborhood |
BP | GO:0006298 | mismatch repair | IEP | Neighborhood |
BP | GO:0006367 | transcription initiation from RNA polymerase II promoter | IEP | Neighborhood |
BP | GO:0009892 | negative regulation of metabolic process | IEP | Neighborhood |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0010629 | negative regulation of gene expression | IEP | Neighborhood |
BP | GO:0016458 | gene silencing | IEP | Neighborhood |
CC | GO:0016459 | myosin complex | IEP | Neighborhood |
MF | GO:0030983 | mismatched DNA binding | IEP | Neighborhood |
BP | GO:0031047 | gene silencing by RNA | IEP | Neighborhood |
BP | GO:0032774 | RNA biosynthetic process | IEP | Neighborhood |
CC | GO:0044798 | nuclear transcription factor complex | IEP | Neighborhood |
BP | GO:0048519 | negative regulation of biological process | IEP | Neighborhood |
CC | GO:0090575 | RNA polymerase II transcription factor complex | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR008422 | Homeobox_KN_domain | 545 | 584 |
No external refs found! |