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Description : associated component SAP18 of histone deacetylase machineries
Gene families : OG0007249 (Archaeplastida) Phylogenetic Tree(s): OG0007249_tree ,
OG_05_0007509 (LandPlants) Phylogenetic Tree(s): OG_05_0007509_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Mp5g08820.1 | |
| Cluster | HCCA: Cluster_149 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00000663.51 | No alias | Chromatin organisation.histone modifications.histone... | 0.02 | Archaeplastida | |
| LOC_Os02g02960.4 | No alias | associated component SAP18 of histone deacetylase machineries | 0.02 | Archaeplastida | |
| Zm00001e013500_P001 | No alias | associated component SAP18 of histone deacetylase machineries | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
| BP | GO:0000723 | telomere maintenance | IEP | Neighborhood |
| MF | GO:0001882 | nucleoside binding | IEP | Neighborhood |
| MF | GO:0001883 | purine nucleoside binding | IEP | Neighborhood |
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0004519 | endonuclease activity | IEP | Neighborhood |
| MF | GO:0005319 | lipid transporter activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005525 | GTP binding | IEP | Neighborhood |
| CC | GO:0005634 | nucleus | IEP | Neighborhood |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006259 | DNA metabolic process | IEP | Neighborhood |
| BP | GO:0006302 | double-strand break repair | IEP | Neighborhood |
| BP | GO:0006333 | chromatin assembly or disassembly | IEP | Neighborhood |
| BP | GO:0006364 | rRNA processing | IEP | Neighborhood |
| BP | GO:0006396 | RNA processing | IEP | Neighborhood |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
| BP | GO:0006869 | lipid transport | IEP | Neighborhood |
| MF | GO:0008168 | methyltransferase activity | IEP | Neighborhood |
| BP | GO:0016043 | cellular component organization | IEP | Neighborhood |
| BP | GO:0016072 | rRNA metabolic process | IEP | Neighborhood |
| MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | Neighborhood |
| MF | GO:0030145 | manganese ion binding | IEP | Neighborhood |
| BP | GO:0031123 | RNA 3'-end processing | IEP | Neighborhood |
| BP | GO:0031124 | mRNA 3'-end processing | IEP | Neighborhood |
| BP | GO:0032200 | telomere organization | IEP | Neighborhood |
| MF | GO:0032549 | ribonucleoside binding | IEP | Neighborhood |
| MF | GO:0032550 | purine ribonucleoside binding | IEP | Neighborhood |
| MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
| MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
| BP | GO:0042592 | homeostatic process | IEP | Neighborhood |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Neighborhood |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
| BP | GO:0051276 | chromosome organization | IEP | Neighborhood |
| BP | GO:0060249 | anatomical structure homeostasis | IEP | Neighborhood |
| BP | GO:0061024 | membrane organization | IEP | Neighborhood |
| BP | GO:0065007 | biological regulation | IEP | Neighborhood |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
| BP | GO:0120009 | intermembrane lipid transfer | IEP | Neighborhood |
| MF | GO:0120013 | intermembrane lipid transfer activity | IEP | Neighborhood |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR010516 | SAP18 | 38 | 157 |
| No external refs found! |